Thermodesulfobium narugense: Thena_0090
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Entry
Thena_0090 CDS
T01488
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tnr
Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0090
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thena_0090
Archaeal homologous recombinant proteins
Thena_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
DUF948
Motif
Other DBs
NCBI-ProteinID:
AEE13741
UniProt:
M1E4S8
LinkDB
All DBs
Position
complement(93314..96964)
Genome browser
AA seq
1216 aa
AA seq
DB search
MKILKIRLKNINSLYNEWTIDFTHPEFISNSIFLITGQTGAGKSTILDAISLALYGKTPR
LGKISRNNNELMSRNTNECFSEVTFETQKGLYKVLWFQKRTRELQPPQRELHDVKNNKII
ETGINKVEEKVIELTGMTYDQFTRSILLAQGDFASFLKANYDERSAILEQITGTQIYSEI
SIMVYEKRKTEREQLGLIKKELEALRVLSPEEERDLIFQQNSYIMQEKICDEELAQLNER
FNAKKKEKDLEIEIEQLERDLLDINQKLSDCEIKKLRLEKAKEARIIYPEYKELKSLEDS
LQDISRSLENKEAKEKGLSKNLEDLKKRLEKIMQKMQKFAEKKEKIGPLINEARTIDLNI
QSLSKQEEIYKKLINDASKKKREILSQIDLTKYKIESTKGRIREINKTLLENSHLEKLKD
SLPELKSFIEMIKDLEERFLDIEKNLSSKGKEETKLTLDVQIEYEKLAQRTKEKEGLESE
ITSLQKDIESLLSYKDINEIKKEFDSKRTKKPYLEMCKSEKERLEKIDLDIKERDKEFES
LKLEKERLEEERKQKEHEKKLVEEFLEANKKKFEEFSLLKNFERTREILEEGKPCPVCGS
THHPYKQRENILIDYSFIEKYNNNLENIEKLKNDILEISTKISLQENKLQNNFAQKERLL
SAKNESLNKIQEIENKVNYHIDLAVLDIEIEKNDIEINNLASIIERYEVLENNINKKNKE
LVSLKEDINSLKEAINSKEQKLNIIKAEISNLQATKEELIDQKHSQENNISCILQKVGIE
TALSKELNILYLDLKKRYEEFLKVKEINIKYQLNLGNEEKNLEKLQFDLKDIEEEIRNYQ
EEFNKITSEIRNLKEKRYKTLRNYDPDLCEKRLREIRENLEKELQDSQIAFSNLEKDRSF
LNGEIENIKKKKYDLEDLYKLKKSKFESLLRKHNFTDRTNFEESLLSDEEIALISKELEA
KELEREVLNSKIFERKRKIEKIRELIGENSQTLEEINKDLEFQKEKLKNIRENIGMLKQK
LTANNETKEQYNNLIQEIEMREKNLKKYDILYDLIGSSDGKKFRSFAQEITFDILIKHAN
RHLKRISDRYILTKDKKEKLCFSVIDNYQAGEIRSTKNLSGGESFIVSLALALGLSSMSS
KNVRVDSLFLDEGFGTLDEETLETALDAISNLNQENKTIGIISHLTYIQERVPTQIRVIP
KPGGKSIIVGPGVSRY
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattcttaaaataaggctaaaaaacataaattcactttacaacgaatggactata
gattttacacaccctgaattcatatcaaactctatatttttaattacagggcaaacgggc
gctggtaaatctaccatattggacgccatctcccttgctttatatggcaaaactccaaga
ttaggtaagatttccagaaataataacgagttgatgtcaagaaatactaatgaatgcttt
tccgaagttactttcgaaacgcagaaaggtttgtataaagtattatggtttcaaaaaagg
actagagaactacaacccccacaaagagagttacacgacgttaaaaataacaaaatcata
gagacagggataaacaaggtagaagaaaaagtaattgaacttacaggaatgacctacgat
caatttacaaggtctatcctgttagcacagggcgactttgcatcctttttaaaagccaac
tatgatgaaagatcggcaattcttgaacaaattacaggcacccagatttacagcgagata
tctataatggtttacgaaaaaagaaagacagagagagaacagttaggattaataaaaaaa
gaacttgaagctctcagagtattaagtcccgaagaggaaagggatctaatatttcaacaa
aattcttatattatgcaagaaaaaatttgtgatgaagaactcgcacaattgaacgaaagg
tttaacgctaaaaagaaagaaaaggatttagaaatagaaatagagcagttagaaagggac
ctcttagatatcaaccaaaagctttcagattgtgagataaaaaaattaagattggagaaa
gccaaagaagcaaggattatttatcctgaatacaaagagttaaagagtctagaggattca
ttacaagatataagccgttctttggaaaacaaagaagctaaagaaaaaggcttgagtaaa
aatttagaagacttaaagaaaagactagaaaaaataatgcaaaaaatgcaaaaatttgca
gaaaaaaaggaaaaaataggacctcttataaatgaagcaaggactattgacttaaatata
caaagtttaagtaaacaagaagaaatatataaaaaactaattaatgacgcctctaagaaa
aagagagaaatattaagtcagatagatttaacaaagtataaaatagaaagcaccaagggg
agaataagagaaattaacaaaaccctcttagagaactcccatcttgaaaaattaaaagat
tcccttccagaattaaagagcttcatcgaaatgataaaggatttagaagagagatttctt
gatatagaaaaaaatttgtcttctaagggtaaagaagaaacaaaattaacgcttgatgta
caaatagaatatgaaaaattagctcaaaggacaaaagaaaaagaaggccttgaatcagaa
ataacatcccttcaaaaagatatagagagtttgctttcgtataaagacattaacgaaata
aaaaaggaatttgacagtaaaagaacaaagaaaccataccttgaaatgtgtaagtcagag
aaggaaagattggaaaagatagatctagatatcaaagaaagagataaagaatttgaatct
ttaaaattagaaaaagaaaggttagaagaggaaagaaaacaaaaagaacatgaaaagaaa
ttagtcgaagagtttttagaagcaaacaaaaagaagttcgaagaatttagccttctaaaa
aattttgaaaggacaagagaaattctggaagagggtaaaccttgtccggtctgcggctct
actcatcatccttataaacaaagggaaaatatcttaattgactactcttttatcgaaaaa
tataacaataatttagaaaacatagagaagctcaaaaacgatattctcgaaataagtaca
aaaattagtttgcaagagaataaacttcaaaataattttgctcaaaaagaaagattgtta
agtgcaaaaaatgaatctcttaataaaattcaagaaattgaaaataaagtcaactaccat
atagaccttgctgttttagatatagaaattgaaaaaaacgatatcgaaataaataattta
gctagcataatcgaaagatatgaggttttagaaaataatataaataaaaaaaataaagaa
cttgtatccttaaaagaggatatcaattcgctaaaagaggctatcaattctaaagaacaa
aagcttaacatcataaaggctgagatctcaaatttgcaagctactaaagaagagttaatt
gatcaaaaacattctcaagaaaataatatttcatgcattctacaaaaggttggcattgaa
acagccttatccaaagaactaaatatcttgtacttagatctcaaaaaaagatatgaagag
tttttaaaagtcaaagaaataaatataaaataccagctaaacctgggaaatgaagaaaaa
aacttagagaaattacagtttgacctgaaagatatagaagaagaaattagaaattatcaa
gaagaattcaataaaattacttcagaaataagaaatctaaaagaaaaaagatacaaaacc
cttagaaattatgatcctgatctatgtgaaaaaaggttaagagaaataagagaaaattta
gaaaaagagttacaagatagccaaattgctttcagtaatttagaaaaagatagatccttt
ctaaatggagaaattgaaaatataaagaagaaaaagtatgatttagaagacttgtataag
cttaaaaaaagtaaatttgaaagtcttttaagaaaacataattttacagatagaacaaac
tttgaagagtcgcttctttcggatgaagaaattgcgctcatatctaaagagcttgaagcc
aaagaattggaaagagaagtgcttaattcaaaaatatttgaaagaaaaagaaagatagag
aaaataagagaactaattggagaaaacagccaaactttggaagagataaataaagacttg
gaattccaaaaggaaaaacttaaaaatatcagagaaaatattggaatgctgaagcaaaaa
ctaacagcaaataacgaaacaaaggaacagtacaacaatttaatacaggaaatagaaatg
agagaaaaaaatttaaaaaaatatgacatattatatgatcttattggatcatcagatgga
aaaaaatttaggagttttgctcaagagatcacgtttgacatattaataaaacacgcaaat
agacacctaaagagaattagcgatagatatatcctcacaaaggataaaaaagaaaagctt
tgtttttctgtaatagacaattaccaggcaggagaaattagaagcacaaaaaatttatct
ggaggagagagcttcattgtaagccttgctttagctcttgggctatcatctatgtcaagt
aaaaacgtcagagtagattcgctgtttcttgatgagggatttggcacattagacgaggag
acactagaaactgctcttgatgcgatatctaatttaaatcaagaaaacaaaacaatagga
ataatatctcacctcacatatatccaggaaagagttcctactcagataagagttatacca
aaacccggcggaaaaagcataatcgtaggccctggagtaagtagatactga
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