Thermodesulfobium narugense: Thena_0091
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Entry
Thena_0091 CDS
T01488
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tnr
Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0091
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thena_0091
Archaeal homologous recombinant proteins
Thena_0091
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
UBL_AVO1
DUF3008
Motif
Other DBs
NCBI-ProteinID:
AEE13742
UniProt:
M1E463
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Position
complement(96951..98204)
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AA seq
417 aa
AA seq
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MNKIKPLRVLHTSDWHIGDTICSKRRYDEFELALNWLYRIVEEKDVDIVLISGDIFNTST
PSSQAQELYYRFLHNISKSRCKHVVITAGNHDSPSFLSAPKEILKALNVHVIGSISDKLE
DEVMVLKDNENIPILIVCAVPYLREKDITFPEEEEIYSEREIKIINAIKKHYDLVFEIAK
NKKTELGLNIPIVVMGHLFLNSAILEDNDGVRDLYVGSLCQIPVEFLPHEADYIALGHLH
TPQSVSKNEKIRYSGSLLPMNFKPYEQKKTVFLAQFYNGALNVESIEIPKKKELISLSGS
FEEIKQKIENLSLTEKEYYLEVIYSGEEIVPNLKEKIEDLPRSNKIEILKIKNNRLNRSS
EDDSEAIDIDLSLDLFSIFERCLDENSISEEQKIELRNAFKEILKSMSEKDLLSENS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaataaagccactgagggttcttcatacgtctgattggcatattggagacacc
atttgttcaaagagaagatatgatgagtttgaacttgccctaaattggctatatagaata
gtagaagaaaaagacgtcgacatagtgttaatatctggagatatttttaacacaagtacc
cctagtagtcaggcacaagagttatattacagatttttgcacaatatatccaaatcaaga
tgtaaacacgtggtgattactgccggtaatcacgactcgccttcttttttgtcagcaccg
aaagagatattaaaggcattaaacgttcacgtaataggatcaatttctgacaaattagaa
gacgaagttatggttttaaaagataatgaaaacatacccatactaatagtttgtgcagta
ccatatttaagagaaaaggacataacatttcctgaagaggaagaaatatatagcgaaaga
gaaataaaaattatcaatgcaattaagaaacactatgacctggtctttgagatcgcaaag
aataaaaaaaccgagttagggcttaatattccaatagtcgtaatggggcacttgttttta
aattccgcaatactagaggataacgatggagttagagatctttatgtagggtcattatgt
cagataccagtagagtttttgccacacgaagctgactacattgccctcggccaccttcat
acgcctcaaagtgttagcaaaaatgaaaaaataagatattctggttctttattgccaatg
aattttaaaccatatgaacagaaaaaaactgtattcctcgcccaattctataacggagct
ctaaacgtggaaagtatagaaattcccaaaaagaaggaactaatatccttaagcggctca
tttgaagaaataaaacaaaaaattgaaaatttatcattgactgaaaaagaatactaccta
gaggtaatttatagcggggaagaaatagtcccaaatttaaaagaaaaaatagaagatttg
ccaagatcaaataaaatagagatactaaaaattaaaaataacaggctgaataggtcttca
gaagatgattctgaagctatagatatagacctaagcttagatttattttcaatcttcgaa
aggtgcttagacgaaaactcaatatcagaagaacaaaagattgaactgagaaacgctttt
aaagaaattctaaaatctatgagcgaaaaggacttgctaagtgaaaattcttaa
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