Thermodesulfobium narugense: Thena_0530
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Entry
Thena_0530 CDS
T01488
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thena_0530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnr03021
]
Thena_0530
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0530
Enzymes [BR:
tnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thena_0530
Transcription machinery [BR:
tnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thena_0530
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thena_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEE14170
UniProt:
M1E6T0
LinkDB
All DBs
Position
517635..518660
Genome browser
AA seq
341 aa
AA seq
DB search
MFGSKENYKLEIKEQLEIENGGKYSKFVLEPLPPGYGATIGNALRRVLLTSIPGSAVIAV
RVDDAPHEYMTLPGMVEDILEFHLNLKKLVVVVSPDISEEETRKLILDVKGPKIVKASDI
QPNAEVQIINKDLYLATLEENGELRAEITVKKGKGYISIEKMKENTRWLSPGSIPLDANF
LPITRVNYSVESTRVGQETDWDKLIFEIWTNGAIEPVNALRIAAEDLISHFRIFAEYGTF
LDSEKPVSDYKETKKDSYLRSQAKMDLEQSIEEIGLQTRIANVLKRSGISTLGDLISKTR
EDILNVPSFGKKSLDELEEILHAKGYRLKSSDENGGDDFET
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgggtcaaaggaaaattataaattagaaattaaagaacaattagaaattgaaaat
ggcggtaaatatagtaaatttgttttagagccattaccacctggttatggtgctaccata
ggcaatgcattaagaagagtgcttcttacatcaattcctggaagtgctgttattgcagtt
agggttgacgatgcgcctcatgaatatatgactttgcctggtatggtagaagacatattg
gaatttcatttgaatctaaaaaaattagtcgttgtcgtttcgcctgatatttctgaagag
gaaacaaggaaactgattcttgatgttaaggggccaaagatagttaaggcttcagatatt
caaccaaacgctgaagtacagattattaataaagacctttatctagctactctggaagaa
aacggcgaattaagagcagaaataactgtgaaaaagggaaaaggatatatttctattgaa
aagatgaaggagaatactcgttggttatctccaggtagtattcctttggatgccaatttc
ttgccaattacaagagtaaattattctgttgagtcgactcgtgttggtcaagaaactgat
tgggataaacttatatttgaaatttggactaatggtgctattgaacctgttaacgccctg
agaattgcagctgaagatctgatatcacattttagaatttttgctgagtatggtaccttt
ttggattctgaaaagccagtttctgattataaagagacgaaaaaggattcttacttaaga
tctcaggcaaaaatggatttagaacagtcaatagaagaaattggccttcaaaccagaata
gcaaacgttcttaaaagatctggtatatcaactttaggggatcttatttcaaagactcga
gaagacattctaaacgttccaagttttggaaaaaaatcattagacgaacttgaagaaatt
ttacatgctaagggttatcgtctaaaatctagcgatgaaaatggaggtgacgattttgag
acatag
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