Thermodesulfobium narugense: Thena_0584
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Entry
Thena_0584 CDS
T01488
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Thena_0584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnr03019
]
Thena_0584
03016 Transfer RNA biogenesis [BR:
tnr03016
]
Thena_0584
Enzymes [BR:
tnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Thena_0584
Messenger RNA biogenesis [BR:
tnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Thena_0584
Transfer RNA biogenesis [BR:
tnr03016
]
Prokaryotic type
tRNA degradation factors
Thena_0584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEE14221
UniProt:
M1E5E6
LinkDB
All DBs
Position
complement(567165..569330)
Genome browser
AA seq
721 aa
AA seq
DB search
MNEVHSITKEVAEGIVINIETGLLAKQANGSVTVRSGDTIVFSAATMSKEARSDIDFMPL
VVDFDEKMYAAGKFPGGFFKREGRPSERAILYSRIIDRSIRPLFPKGLRNDVCISSFPLS
IDNDFPVDVLSIIASSAALCISDIPFDGPVGAVRVGEIDKKFILNPTIDQIEKSDIDIVI
VGKEDNILMIEGSFNEIPEDKIIEIINYALPAITKICDIQKELISLVKPTKSLVYLQEPT
EDITSSLDSILTDNITDKFPLKTKQDFENLEKELKDEILSVLSDRFGSEFVEANILLINQ
AFQNKLKKIIRNYVIKNKKRVDGRSLDEIRPISIQVGLLPRAHGSALFTRGQTQALSIAT
LGTQEDSQIIDTLYQSSNEIRKRYMHHYNFPGFSVGEARPSRGPGRREIGHGALAEKALL
PVLPKESDFPYTIRVVSEILESNGSSSMASACGSSLSLMDAGVPISKHVGGIAMGLIYEN
EEIIILSDITGLEDAIGDMDFKVTGTIDGVSALQLDVKVPGIPIDALSKAIKKAYEGRKS
IIEKMNQAISHPREMLSNYAPRIEMIQINPEKISDVIGQGGKIIKKIIEETGSKISIEQD
GKIYIASTSKEGLNKTIEIIQNITKPIVPGQVYIGKVTKIFNFGALVEISPGKEGLVHIS
ELSKTRVKNVEDVLKLGDEVTVKVLDLESNGKINLSIKALSENPSDLKNDRHSGKQKRTN
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtacacagtatcacaaaagaagtagcagaaggcatagttataaatattgaa
actggacttttagcaaaacaagcaaacggttcagttactgttagatcaggagatactata
gtttttagtgcagcaactatgtccaaagaagccagaagcgatatagatttcatgcctctt
gtagtcgattttgatgaaaagatgtatgccgcgggaaaattccctggcggttttttcaag
agagagggaagaccaagtgaaagagctatcctatatagcaggattatagacagatctatt
agacccttattcccaaagggattaagaaatgatgtctgtatctcttcctttcctctttcg
atagataatgatttccctgtagatgtgctttctattatcgcttccagtgcagctttatgt
atttcagacattccttttgacggacctgtaggcgctgttagagttggcgaaattgacaaa
aagttcattttaaatccaacaattgatcaaatcgaaaagagtgacatagacattgtaatt
gtaggtaaagaagacaacattcttatgatagaaggaagctttaacgaaatccctgaagat
aagataattgaaataatcaattatgctcttccagcaataacaaagatatgcgacatccaa
aaggagttaatatcgttagtaaaacctaccaaaagcttagtttatttacaagaaccaaca
gaagacatcactagctctttagattccattctaacagataacatcacagataagtttccc
ctaaaaacaaaacaagattttgaaaatttggaaaaagaactaaaggacgaaattttgtct
gttttgtccgacaggttcggatccgaattcgtagaagcaaatattttactaataaaccag
gctttccaaaataaactaaagaaaataataagaaattatgtgataaaaaataaaaagaga
gttgatggcagaagtttagatgaaattaggccgatatccattcaagttggcttgttacca
agagcacacggttcagcccttttcacaagaggtcaaacacaagcgcttagcattgcaaca
ttgggaacacaagaagattctcagataatagataccctttatcaatcaagcaatgaaatc
agaaaaagatacatgcatcattataattttccgggttttagcgtaggtgaagcaaggcct
tcaagggggccgggaagaagggaaattggtcatggtgctctggcagaaaaggctttgtta
cccgttttaccaaaagaatctgatttcccctatactataagagttgtttctgaaatactt
gaatcgaacggatcatcttctatggcttctgcatgcggttcttctctatcactaatggat
gcaggtgtccctatctcaaaacacgttggcggaatagccatgggacttatttatgaaaac
gaggaaattattattttatcggatattaccggtttagaagatgcaataggagatatggac
tttaaggttaccggaactattgatggagttagcgcgctacaactagacgtaaaagtacct
ggtatacccattgatgccctctcaaaagcaattaaaaaagcatatgaaggcagaaagagt
attatagaaaagatgaatcaagctatatcacaccctagagaaatgctctcaaactatgcg
ccaagaatagaaatgatccaaataaatccagaaaaaataagtgatgtaataggacaaggc
ggcaaaataatcaaaaagataatagaagaaactggctcaaagataagtattgagcaggac
ggcaaaatttatatagcatccacatccaaagagggtctaaacaagactatcgagattata
caaaacataactaaaccaatagtcccaggacaggtttatatcggaaaagtaaccaagata
tttaactttggtgctcttgttgaaatttctcccggaaaagagggtctggttcatatttct
gagctttcaaagacaagagttaaaaacgttgaagatgtcttaaagttgggcgatgaagta
actgttaaagttcttgatcttgaaagcaatgggaaaataaatttaagcataaaggctctc
tcggaaaatccatcagatcttaaaaatgatagacattcaggaaagcaaaaaaggactaac
agataa
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