Thermodesulfobium narugense: Thena_0697
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Entry
Thena_0697 CDS
T01488
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr03030
DNA replication
tnr03430
Mismatch repair
tnr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thena_0697
03430 Mismatch repair
Thena_0697
03440 Homologous recombination
Thena_0697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnr03032
]
Thena_0697
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0697
Enzymes [BR:
tnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thena_0697
DNA replication proteins [BR:
tnr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thena_0697
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thena_0697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEE14332
UniProt:
M1E4N4
LinkDB
All DBs
Position
672729..676145
Genome browser
AA seq
1138 aa
AA seq
DB search
MSFVHLHVHSEYSLLDGASRLDDIILKAKNDNMQALALTDHGNMYGALKFYSLAKEHEIK
PLIGCEMYITDDMTKQTRANGDLDTYLSHLILIAKDFEGYKNLVRLVSFGFLKGFYYKPR
IDLKTLFEYKKGLIVSSACMYGRIPQLILSNKKDQAVELAKTFKEQFGDDFYLEIQDHGL
PEEKKLIPVIINMSQDLNIPLIATNDSHYTNKEDAEFHDVLLCIQTKKTVQDENRMKFNT
DSLYFKTSEEMKELFSYCKDAVENTLIVADKCSLELPIGKVTVPKFPCPEGKSEREYLNL
LIEKGLNRRYKGNITKEIEERLKYELDIIQKTGYEGYFLIVSDYINYAKENGIQVGPGRG
SAAGSLVAYVLGITDIDPLKYNLLFERFLNPERVNPPDIDVDFCIEKRAQVLNYLVKRYG
QENVAQIGTFGTMNARAVVRDVGRTLGKPLSIVDKLAKLIPNKPGSQATLKEAEELQEVK
QFLNSNPSLKELWEKSIKLEGLTRHSSVHAAGVVISPFPIYDLIPLQRPSEGDVPVTQWP
MEDVEKSGFLKMDLLGLRNLTVIGKTLELIEKTRGIKVDIEDIPLDDPKVYELLERGETL
GVFQLESSGMQQLLKEVKPDKFEDLIAILALYRPGPMNSGMVEQFIRRKHKKEPVVFIHK
DVEPILSETYGVMIYQEQIMQLASILAGFSLGEADLLRRAMGKKKAEVMAAQKPKFVEGA
INKGLISREQAEKIFDDMAKFAEYGFNKSHSASYALITYRTAWLKVYYTPEYMAALLSSV
SSDTDKVAEYIKEAKKFGVEVLSPDVNESGENFTVIGNKIRFGLSAIKGVGKAAIDTILA
NRLSDGNFKNLRDFIYRTSSKSVNKKIYENLIKAGALDNLYKDRLNLLDQLDEVLALVKK
STKTDNEHSLFNEAFDEEELYIDNDIEIIPKKDFDPSLKLAFEKEVLGLYVSGHPLKPYK
FLINSISNFNISSLNELDTEKVKICGIVFNKKQVFKKDGSFFFVLNIEDLTGSVECIYSK
KDKAIIDEIMENDIVWIEGRLIKKDEGSRIIIDQIGKINRKIFHIKFYKKLCSEGALMKL
KEELSILKGDIPLIIHFVDENAEKLCLADSNYFVNVESDIVERINKFRGVECWLEENR
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgttcatcttcacgtacacagtgaatacagtttactggatggcgcaagtaga
ttagatgatataattctcaaggcaaaaaatgataacatgcaagcactagcgcttactgac
cacggaaatatgtatggcgcccttaagttttattctttggcaaaggaacatgaaataaaa
ccattaataggttgtgagatgtatattactgatgatatgaccaaacagacgagagctaat
ggcgatcttgatacctatttatctcatttaatccttattgcaaaagattttgaaggctat
aaaaatctagttagactagtttcttttggttttcttaaaggattttattataaaccaagg
attgatttaaaaactttatttgaatacaagaaaggtctaatagtttcaagtgcttgtatg
tacggaagaatacctcaactaattctctctaataaaaaggatcaagcagttgaacttgca
aaaacctttaaagaacaatttggtgatgacttttatcttgaaattcaggatcatggactt
cctgaagagaagaagttaattccagtaataataaatatgtctcaggatttgaatattcca
ctaatagctactaatgattctcactataccaataaagaagatgctgagtttcatgacgta
ctactttgcattcaaacaaaaaaaacagttcaggatgaaaatcgaatgaaattcaatact
gattctctttattttaaaacttctgaagaaatgaaagaacttttttcttattgcaaagat
gctgttgagaatactttaatagttgcagataaatgtagtttagaattaccaattggcaag
gtaacagtaccgaagtttccttgtcctgagggcaaaagtgagagagaatatttgaaccta
ttaattgaaaaaggcttaaatcgaagatataagggcaatataaccaaagagatcgaagag
cgtttaaaatatgaacttgatattatacaaaaaactggttatgaaggttattttctaata
gtatctgattatattaattatgcaaaggagaatggaattcaagttggtcctggtagaggc
tctgctgctgggagtctggttgcatatgttcttgggataactgacattgatcctttgaag
tataatttgctttttgagagattcttaaatccagaaagggtaaatccacccgatattgat
gttgatttttgtatagagaagagagcacaagttttgaattatttggttaaaagatatggt
caagaaaatgtagcccaaattggtacttttggaactatgaacgcaagagcagtagttaga
gatgttggaagaacattaggtaagcctcttagtattgttgacaaactagcaaaattaatt
ccaaacaagcctggttctcaagcaactttgaaagaagcagaagaactgcaagaagtaaag
cagttcttaaattctaacccctctctaaaagagctttgggaaaaaagcataaagttagaa
ggattgacacgccatagctctgttcatgctgctggtgtggtgatatcgccttttcctatt
tatgatttaatacctttacaaagaccatctgaaggtgatgttccggtaacacaatggccc
atggaagatgtagaaaaatcaggatttttaaagatggatttgttggggctaagaaactta
acggtaattgggaaaactttggaattaattgaaaagactagaggtataaaggttgatata
gaagatattcctcttgatgatccgaaagtttatgagctcttagaaagaggagagactctt
ggagtttttcagctagagagttccggaatgcaacaacttttaaaagaagttaagcctgac
aaatttgaagatttaatagcaatacttgctctttacagacctggtcctatgaattctgga
atggtagaacaatttattagacgaaagcacaaaaaggaacctgtagtatttattcataaa
gatgttgagccaattctttctgaaacgtatggcgttatgatttatcaagagcaaataatg
cagcttgcaagcatattggcagggttttctctaggagaagcggatcttttaagaagggca
atgggcaaaaaaaaggcagaagtgatggcggcccaaaaacctaagtttgtggaaggggct
ataaacaaaggcttaatttcaagggaacaagctgaaaaaatatttgatgatatggcaaag
tttgcagagtatggttttaataaatctcatagtgcttcttatgctcttattacatataga
actgcttggttaaaggtttattatactcctgaatatatggctgctttgctttcttctgtg
tcttctgatactgataaagttgctgagtatattaaagaagcaaaaaaatttggcgtggag
gttttatctcctgatgtaaacgaaagtggagaaaactttactgtaataggaaacaaaatt
agatttggtctttctgcaattaaaggagttggtaaggctgcaattgatactatattagca
aacagactctctgatggcaattttaaaaatttgagagattttatttatagaactagttca
aagtctgtaaataaaaagatttatgaaaatttaataaaagctggagcactcgataatctg
tataaagataggctaaatcttttagatcagttggatgaagttttggctttggtaaaaaag
agtaccaaaacagacaatgaacatagtttatttaatgaagcctttgacgaggaagagctt
tatattgacaatgacattgaaattattcccaaaaaagactttgatccaagtttaaaactt
gcatttgaaaaggaagttcttggattgtatgtcagtgggcatccacttaaaccttataaa
tttttgattaatagtatttcaaattttaatatttcttctctaaacgagctcgatactgaa
aaggtaaaaatttgtggaatagttttcaataagaagcaagtctttaaaaaggatggctcc
tttttctttgttttaaacattgaggatttaactggaagcgtagagtgcatctattctaaa
aaagacaaggctattattgatgaaataatggaaaatgatattgtttggattgagggaaga
cttataaaaaaggatgagggatcaagaataattattgatcaaataggaaaaattaacaga
aagatatttcatattaaattttataagaagctttgttcagaaggtgcacttatgaaatta
aaagaagaactttcgattttaaaaggcgatataccattaattattcactttgttgacgaa
aacgcagaaaagctttgtttggcagattcaaattactttgttaatgtagaaagcgatatt
gttgaaaggattaataagtttagaggcgttgagtgctggcttgaagaaaataggtaa
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