Thermodesulfobium narugense: Thena_0969
Help
Entry
Thena_0969 CDS
T01488
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tnr
Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnr03032
]
Thena_0969
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0969
Enzymes [BR:
tnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Thena_0969
DNA replication proteins [BR:
tnr03032
]
Prokaryotic type
DNA Topoisomerases
Thena_0969
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thena_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_PaaD
Zn_ribbon_recom
DNA_ligase_ZBD
Zn_ribbon_3
zf_Rg
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AEE14598
UniProt:
M1E7D1
LinkDB
All DBs
Position
complement(967790..969970)
Genome browser
AA seq
726 aa
AA seq
DB search
MSESKKKVMIVESPSKTKTLSKILGKSLKILASKGHVRDLPKTRLGIDIDNNFEPTFRIM
KEKSKLIEDLRKEVKDAKIVYLAPDPDREGEAIAWHLKEVLNLKDGQYKRVYFNEITEKA
VKEAMKQPRDLDTKLIEAQKARRILDRIIGYKISPFLWKTLQRGLSAGRVQSVALRMVVE
REREIRNFEIKKYYTFQIKCLDDNNKEFTLKLCDKKYNPVKFFDENEAEEVLKRLDGAKL
AIKSLETKEKKKSSPFPFITSTLQQEAQKKHGFSLKKTMKLAQSLYEGLQIGPEGSTGLI
TYMRTDSFNVSLEAQESAKELIIKLFGEDFYKKYYPKKNKGSQEAHEAIRPTSVFRLPDE
IKQYLGKEYYLLYDLIWKRFMASQMANAIYDSLEIKGEAKNYNFFARFLNLKFPGYMVLW
DEEKETEENDEVFPKLTEGKLYEIISIDKIEGFLSPPPRYTEATLVKRLEELGIGRPSTY
APTIITLQERNYVRKEGKILIPTKIGEEVTDILIKYFPNIVDYEFTAKMESDLDKVFNEE
DRVKLLKNFYQPFEMSLHNFEETSSEVLSSLASEKKCPICGSDMKLRISKFGRFYSCSRY
PECKGKLPFEDSSNSEQNSNEESLKKNEIDVKESDVECPICGSKMVEKRSKFGKFLACSR
YPECKGTLPYGKKVEQRCPKCGGQLIRTFSKKGKPYYKCVNKDCDFYSFKLPGISENLKV
EEPIKE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtaagaagaaagtaatgattgttgagtctccatcaaaaacaaaaactctt
tctaagattcttggcaagtctttaaagattttagcatcgaagggtcatgttcgcgacttg
ccaaaaacgagacttggtattgatatagataacaattttgaaccgactttcagaattatg
aaagagaaaagtaaacttattgaggatttaagaaaagaggtgaaggatgcaaaaatagtt
taccttgctccagatcctgatagggagggcgaggcaatagcatggcatttaaaagaagtc
ctcaatttaaaggatggtcaatacaaaagagtttatttcaatgaaattactgaaaaggct
gtaaaagaagcaatgaagcagccaagagatttagatacaaaacttattgaagcacaaaag
gcaagaaggattttagatagaataataggatacaagatatctccgttcctctggaaaact
cttcaaagagggctttctgcaggcagagtccaatcagttgcgctaaggatggtagttgag
agagaaagagaaataagaaattttgaaataaaaaaatattatacctttcagatcaaatgt
ttagatgacaacaacaaagagtttacattgaagttatgtgataaaaaatataatcctgta
aaattttttgatgaaaatgaagctgaggaagttcttaaaagattagatggagcaaaactt
gctataaaaagtttagaaacaaaagaaaagaaaaaaagttccccctttccttttatcact
agcactcttcagcaagaggcgcaaaaaaaacacggttttagcttgaagaaaacaatgaaa
ttagctcaatcattatacgaaggtcttcaaattggtcctgaaggaagcacaggattaatt
acatatatgagaacagattctttcaacgtttctcttgaagcacaagaaagtgcaaaggag
ttaattataaaattattcggagaagacttttataaaaaatattatccaaaaaagaataaa
ggcagtcaggaagcacatgaagctataagacccacttcggtttttagattgccggacgaa
ataaagcagtatcttggtaaagaatattatcttttatacgatctcatctggaaaagattt
atggcaagccagatggcaaacgcaatctatgattctcttgagattaaaggtgaagccaaa
aattataattttttcgccaggtttttaaatttaaaattccctggatatatggttttgtgg
gacgaagaaaaagaaactgaagaaaatgatgaagtttttcctaaattaacagagggaaag
ctttatgaaataatttctattgataaaattgaaggatttctttccccacctcctagatat
actgaggctactcttgtaaaaagattagaagagcttggtattggtaggccttctacatat
gcacctactatcatcactcttcaagagagaaattatgttagaaaggaggggaaaatttta
attcctacaaaaattggtgaagaagtaacagatatattaattaaatactttcctaacatt
gtggattatgaatttactgcaaaaatggaaagcgacctagataaagtttttaatgaagag
gatagggtaaaacttcttaagaatttttatcaaccgtttgaaatgagtcttcataatttt
gaagaaacttcaagtgaagttcttagctctttggcttcagagaaaaaatgcccaatatgt
ggttctgatatgaaactaagaattagtaaatttggcagattttactcttgctcaagatat
ccagagtgtaaaggcaaattaccctttgaggactcttctaatagtgaacaaaatagcaat
gaagaaagtttgaagaaaaacgaaattgatgttaaagaatcagatgttgaatgcccaata
tgtggcagcaaaatggttgagaagagaagcaaatttggaaagtttttagcttgctcaaga
tacccagaatgtaaggggactcttccttatggaaagaaggttgaacaaaggtgtccaaag
tgtggtggtcaattaattaggacttttagtaaaaaaggcaaaccatattataagtgtgtg
aataaggattgtgatttttatagtttcaaactaccgggtattagcgaaaaccttaaggtt
gaagaacctataaaagaatag
DBGET
integrated database retrieval system
