Thermodesulfobium narugense: Thena_1210
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Entry
Thena_1210 CDS
T01488
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thena_1210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_1210
Enzymes [BR:
tnr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Thena_1210
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Thena_1210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AEE14829
UniProt:
M1E935
LinkDB
All DBs
Position
1247422..1248186
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AA seq
254 aa
AA seq
DB search
MIITTFNVNSIRSRTDIVNLLIEKHNPEIIALQEIKCTPDLFPNLAFPDYKCLVSGEKSY
NGVAVCTKLDSSHFENEFQDTVNQKRSLFVKFENFILMNIYFPHGDLRGTDKFYYKLDFY
KKLLAFLKENFTPNDPIIMLGDFNVALTDFDVYDPQILKDTIGTMPEERKALRELLNYGF
IDTYRHLHPNDPGFTWFNYIGGDIWKNKGMRIDYILVTKPLINKVKNVEVDLSLRKRRTP
KPSDHAPLVMEINF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgattataactacttttaatgtaaattctataagaagtaggactgatattgtaaactta
cttatagaaaaacacaacccagaaataatagctctccaggagataaagtgtactccggat
ctttttccaaaccttgcatttccagattacaagtgtctggtatcaggagaaaaatcatac
aatggagtagcagtttgcacaaaacttgattcaagtcattttgaaaacgaatttcaagac
actgtaaatcagaaaagatctctttttgtaaagtttgaaaactttattcttatgaacata
tacttccctcacggcgaccttaggggtacagacaagttttattataaattagatttttat
aaaaaattacttgcttttctcaaagagaactttactccaaacgatcccataattatgctc
ggagactttaatgtagctttgacagattttgatgtatatgacccacaaatcttaaaggac
actatcggcacgatgccagaagaaaggaaagctttaagagaacttctaaattacggtttc
atagacacatacagacacctacaccccaacgatccgggttttacatggtttaactatatt
ggaggcgacatatggaaaaacaagggcatgagaatagattatattttggtaaccaaacct
cttataaataaagtaaaaaatgtagaagttgacctgtcccttagaaaaagaagaacacca
aaaccatccgatcacgccccccttgttatggaaattaatttctaa
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