Thermodesulfobium narugense: Thena_1220
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Entry
Thena_1220 CDS
T01488
Name
(GenBank) WD40 repeat-containing protein
Organism
tnr
Thermodesulfobium narugense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
WD40_like
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Beta-prop_NWD2_C
BBS2_Mid
KNTC1_N
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_SPT8
CFAP43_N
RMC1_N
Beta-prop_IP5PC_F
Cytochrom_D1
DUF7099
RAB3GAP2_N
WD40_2
Ge1_WD40
Beta-prop_IFT122_2nd
DP
Motif
Other DBs
NCBI-ProteinID:
AEE14839
UniProt:
M1E938
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All DBs
Position
1257960..1260728
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AA seq
922 aa
AA seq
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MNKKTINFIFEQKIDIPQSNFTEGNFPILTGNLIDKLRKRKDWIFITAFSPDGIHFASGG
FNSNILLWNIFKEKPLDSLSGHEDWIIALAFSHDGKYLLSGSRDNNIILWSVQERKLITK
FEGHQNRISSLAFSPDDSLIASGGYDSTIKIWALDSKKPIKTIDTSPLWPTSICFASKNL
KLIAGFNDGTIIIYNLNNYFQTSVIKVFQNWIDSIKCSKDELLFYASNTDGFIKILETKT
SKLIFSKKIPFKASLFPYNEKSLNFVDNLSIYMMLYERSPENFLKGIRNYNNNIESYSHK
IFLKDYKDFAFDFSKNSDIIACSERSNYIYIFNSKTQDFIKIDISSSWIKALSISDDGNL
LAAGGYDGEIKIFSLKTGYLISSIIDHASWINSLKFSTGSKLIAAGLEDGTILIIKIKDM
EVVEKFNLSNSIYKLDFFNNNKFVLVSTIDGNLFRIDLANKEIELIQKLNNSWISNFALL
NTEKAFITASEDGYLYLIENNKVINSNKIHDSEITMLELLDDNTLLTGSLDLFLKQVNLT
DLKVVSEKRFDGLPLAYNKNFNKLFISHFRNISIYNRTDSQELGNPELNKPTIEFNFDFN
SKQFNISKDCEILFILKGNNQLEKISLTNLNALFQIKPLEPIVTFCNSFDFSKLVTGHFN
SEIKVYDTEKNQIIKELKSYEGSIISSINLSIDESFLLVGFEDGTIELWLFNEEKNLWCI
SNNSEPISKLTFSYDKLFFISKNKYSLDTDLWSTIEGTKLGTFPNKNFCFKSFAFSPNSE
SVLYLNDKNQLSIWFLKEGKEITIPEKKDEPFITYFSYSPDSSKIVVGYIDGTLQIFSLE
GELIKEEDNKSSSITFILFKDEKSFFTSHLDGSIRIHTLEDFLDIEPIFAHHSSIDFLSY
NAEKNLLASYSTIEHTLKAWNL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaaaaacaataaattttatttttgaacaaaaaatcgatatccctcagtcaaac
tttactgaaggaaattttccaattcttacaggtaatcttattgacaaactaagaaaaaga
aaagattggatatttatcactgcattttctcctgacgggatccactttgcttcaggcggt
tttaattctaatattcttttgtggaatatttttaaagaaaaacccttagatagcttgagt
ggtcatgaagattggataattgcgcttgctttctcccacgacggaaaataccttctttca
ggaagtagagacaataacattattctttggtctgttcaagaaagaaaactcatcactaaa
tttgaaggacaccaaaatagaatttcttcgctagcattttcaccagatgatagcttgatt
gcatccggtgggtacgattcgactataaaaatctgggctcttgattccaaaaaaccaata
aaaacaattgatacatctcctttgtggcctacatctatctgttttgctagcaagaatcta
aagctaattgcaggtttcaatgacggaacaataattatttataatttgaacaactatttt
cagacaagtgtaataaaggtatttcaaaattggatagattcaataaagtgcagtaaagat
gaattgcttttttatgcatcaaacacagatggattcataaaaatattagaaacaaaaact
agtaaattaatctttagcaaaaaaatccctttcaaagcctctttatttccctataacgag
aaaagcttaaactttgtagacaacttaagtatatatatgatgctatacgagagaagtcct
gaaaattttctaaagggaataagaaactacaacaacaatattgaaagttacagccataag
atatttttaaaagattataaagattttgcttttgatttttcaaaaaactcagatatcata
gcttgttctgaaagatcgaactatatttacatcttcaattcaaaaacccaagattttata
aagatcgatatctctagttcctggataaaagctctttctatatctgatgacggcaatttg
ctggctgctggaggatatgatggagaaataaagatattttcgcttaagactggatattta
attagttcaattattgaccatgcctcatggataaattccttaaaattttcaactggtagc
aaattaatagctgctggtttagaagatggaactattttgatcataaaaattaaggatatg
gaagttgtagaaaaatttaaccttagtaatagcatatataaactagacttttttaacaac
aacaagtttgttttagtatctacaatagatggcaatctatttagaattgacttagccaat
aaagaaattgaattaattcagaagttaaacaactcatggatttcaaactttgctctttta
aataccgaaaaagcttttattacagcttctgaagacggttatctctatttaatagaaaat
aataaagtaataaatagtaacaaaattcacgattcagaaataacaatgttagaactatta
gacgataatactttacttaccggttctctagacttatttttaaagcaagttaacttaacc
gatctaaaagttgtttctgaaaaaagatttgatggcttacctttagcatataataaaaat
tttaacaagttgtttatctcacattttagaaacatatctatatataatagaactgattca
caagaattaggaaatccagaacttaataaaccaacaatagaatttaattttgactttaat
tcaaagcaatttaatatatcaaaagattgcgagattttattcatattaaagggcaataat
caattagaaaagatatctttaacaaatcttaacgctttgtttcaaataaagccattagaa
cctatagtaactttctgtaatagttttgatttttctaaattagttactggccattttaat
tctgagataaaagtttacgatactgaaaaaaatcaaattatcaaagaattaaagtcatat
gaaggttcaataatatcttcgattaatttgtcgatagacgaaagttttctccttgtaggc
tttgaagatggaaccattgaattgtggttatttaatgaagaaaaaaatctctggtgcata
agtaataactctgaaccaattagcaagctaacatttagttatgacaagttatttttcata
tcaaaaaataaatatagtttagacacggatctgtggtctactattgagggtacaaagctt
ggaactttcccaaacaaaaatttttgttttaaaagctttgctttctctccaaattcagaa
tcagttttgtatctaaatgacaaaaatcaactctccatctggtttttgaaggagggaaag
gaaataacaattcctgaaaaaaaagatgaaccctttataacatatttctcttactctccg
gattcatcaaaaattgtagtaggttatattgatggtacattacaaatattttcgcttgaa
ggagaacttataaaagaagaagataacaaatctagttctattacttttatattgtttaaa
gatgaaaaatctttctttacctctcatctggatggatcaatcagaattcatacactggaa
gatttcttagatatagaacctatttttgctcaccattcatcaatagattttctgtcttat
aacgctgaaaaaaatcttttagcctcttattccactatagaacatacgttaaaagcatgg
aacttataa
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