Thermodesulfobium narugense: Thena_1375
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Entry
Thena_1375 CDS
T01488
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr03420
Nucleotide excision repair
tnr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Thena_1375
03430 Mismatch repair
Thena_1375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_1375
Enzymes [BR:
tnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thena_1375
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thena_1375
MMR (mismatch excision repair)
Other MMR factors
Thena_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_22
ResIII
DEAD
AAA_11
SLFN-g3_helicase
NPHP3_N
Helicase_RecD
HHH_5
HHH
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AEE14992
UniProt:
M1E5C5
LinkDB
All DBs
Position
complement(1422710..1424542)
Genome browser
AA seq
610 aa
AA seq
DB search
MDLNLNEDQKRAVYSDSRALLIVAGAGTGKTRVLTTRAARLIKENPDARYLLLTFTKKAA
REMTTRVRELIEEDTKNRLYSGTFHSFCSNIIRRRSERVGLTNDFVIIDESDSLDLMKKV
FSRIYSKEKIDSLIFKPKDILSLYSYARNNNQDFIEIVQRKYKYVNFEDIKKIISLYELN
KKERNYLDFDDLLMYGLLAIKTLEKSPFDEVLVDEFQDTNQIQAEMLYYFYDLGSRISAV
GDDAQSIYSFRGAYYENMFNFIKRLDAEKIILSSNYRSTQQILDIANSIIQSSYSSIKKE
LVANVRLKENVKPKLVIVSDDWEEARYVAREMQKFGEKGLKVAALYRAAYIGRNLESQLN
SMGIKYSFYGGQKLTESAHAKDFMSFLRVFVNPKDEIALIRILKMFPGIGEKKAEKIKDA
VISGDNLKKALSKEKNLEELNIFFDKLFKITDWHDLLELVFDFYKDIMNRLYPENYEERE
EDLIKFMDMSSNYDNLVEYLEAFTLDPVEKSEFDNNNVILSTIHSAKGLEFDVVFLLSVI
ESVYPHFRAQSTDEIEEERRLFYVAITRAKQRLIFTFPRHSKKSRGYFAKNTISPFLREK
DNYLEVFIAR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaaatttaaatgaagatcaaaaaagggcagtttattctgatagcagagcgctt
ttgatagtggctggagcaggtactggcaaaacaagagttttaacaactagagcagcaaga
cttataaaagaaaatccagatgcaagatatcttctactcacctttactaaaaaggcagca
agggaaatgaccacaagagttagagaattgattgaagaggatacgaaaaatagactttac
tctggcacatttcattctttttgttcaaatataattaggaggcgttctgaaagggttggg
ttgaccaatgattttgttatcattgatgagtctgattctcttgatctgatgaagaaggta
ttttctaggatctatagcaaagagaaaattgattcgctaatatttaagccaaaggatatt
ttatcattatactcatacgcaagaaataataaccaagactttattgagattgttcaaaga
aaatataaatatgttaattttgaagatattaagaagattataagtttatatgaactaaat
aaaaaggaaagaaattatctagattttgacgatcttttgatgtatggattacttgcaatt
aagactcttgaaaaaagtccttttgacgaagttttagtagatgagtttcaggatacaaat
caaattcaagctgaaatgctgtattacttttatgatttgggttcaaggataagtgcggtt
ggcgatgacgctcaaagcatttattcttttagaggtgcttattatgaaaatatgtttaat
tttattaaaagacttgacgctgaaaaaattattctttcttcaaactatagatcaactcaa
caaattttagatattgcaaattctattattcagtcttcttatagttctatcaaaaaagag
ttagtagcaaatgtgagattaaaagaaaacgttaaacctaaattggtaattgttagcgat
gactgggaagaagcaagatatgtagctagagaaatgcaaaaatttggcgaaaaaggattg
aaggtagctgctttatatagagcagcgtatattggcagaaaccttgagagccaacttaac
tcaatgggaataaaatattcattttatggtggtcaaaagttaactgaaagcgctcacgct
aaagactttatgtcgtttttgagagtttttgtaaatccaaaggacgaaatagcgctaatc
agaattttaaagatgtttcctggaattggggagaaaaaagcagaaaagattaaagatgct
gtgattagtggggataacttaaagaaggcattgtctaaggaaaaaaatcttgaagaatta
aatattttttttgataaattatttaaaattaccgattggcatgacctcttggagttggtt
tttgatttctataaagatataatgaacagactttatcctgaaaattatgaagagagagaa
gaagatttaatcaaattcatggatatgagctctaattatgataatttggtagaatatctt
gaagcctttactcttgatccggttgaaaaatctgaatttgacaataataatgtaatttta
agcactattcattcggcaaaaggattggaatttgacgtagtattcctattatcagtgata
gagagcgtttacccacactttagggcccaatcgactgatgaaattgaagaagaaagaaga
ttattttacgtagcaataactagagctaagcaaagacttatatttacatttcctagacat
tcaaagaaaagcaggggctattttgcgaaaaacactattagtcccttcttaagggaaaag
gataattatctggaagtttttattgcaagataa
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