KEGG   Thermococcus nautili: BD01_0606
Entry
BD01_0606         CDS       T03065                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS
  KO
K03057  transcription factor S
Organism
tnu  Thermococcus nautili
Brite
KEGG Orthology (KO) [BR:tnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tnu03021]
    BD01_0606
Transcription machinery [BR:tnu03021]
 Prokaryotic type
  Archaeal type
   Basal transcription factors
    TFS
     BD01_0606
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_Ribbon_1 Zn_ribbon_IS1595 Zn_Ribbon_YjdM Baculo_LEF5_C RUBY_RBDX Zn_ribbon_PaaD Zn_Ribbon_TF Zn_ribbon_4 zf-ChsH2 DZR Rpr2 Zn_ribbon_TiaS Cys_rich_CPCC Zn_ribbon_3 Zn_ribbon_8 Zn_ribbon_Nudix IBR Lar_restr_allev GpA_ATPase Auto_anti-p27 DUF6758 DUF6980 DUF7351 DUF4379 Zn_ribbon_Brz eIF-5_eIF-2B Vps36-NZF-N FYVE_2 Transket_pyr RecR_ZnF
Other DBs
NCBI-ProteinID: AHL22230
UniProt: W8P485
LinkDB
Position
complement(524351..524683)
AA seq 110 aa
MKFCPKCGNLMLPDRKKKVWVCRVCGYEEPFDEEKDRDKTRITQKVEHKPDEEIVVIEQD
VKTLPTTKVTCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHVWRAYE
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaagttctgtccgaagtgcggtaaccttatgctcccggaccggaagaagaaggtctgg
gtctgtcgcgtctgtggctacgaggagccctttgacgaggagaaggacagggataaaacc
aggataacgcagaaggtcgagcacaagccggacgaggagatagtagtcatcgagcaggac
gtcaagaccctgccgaccaccaaggtcacctgccccaagtgcggtaacgacacggcctac
tggtgggagatgcagacgagggcaggcgatgagccgagcacgatattctacaagtgcacc
aagtgtggccacgtatggagggcctacgagtga

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