Thermococcus nautili: BD01_0701
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Entry
BD01_0701 CDS
T03065
Name
(GenBank) Superfamily II helicase, archaea-specific
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
tnu
Thermococcus nautili
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnu03019
]
BD01_0701
Messenger RNA biogenesis [BR:
tnu03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
BD01_0701
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHL22324
UniProt:
W8PJR1
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All DBs
Position
610364..612865
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AA seq
833 aa
AA seq
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MLFVIRSGRKKNELEAFFIENEPEKLSEMKNLKADRIFRLIMREGRLFKVLEGSNYRNPK
EIEKLLRQARIVLVNADEWEDYFKRRLQNKRVEKAELCRLCLLEGRITVLTPGNRIKYRN
EYICERCAEDELKRELRFRFNSIAMFEQAKKLLDRFRDLDKVLYAFDPRFDPTKHPEVTK
WDELKAKHVKVERVKVDELPLPERFKEVLKAEGVKELLPVQSLAVKNGLLEGENLLVVSA
TASGKTLIGELAGVPKAMEGKKLLFLVPLVALANQKYEDFRRRYSKLGLRVAIRVGMSRI
KTRDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGNVGTIVVDEIHTLDDEERGPRLDG
LIARLRRLYPKAQFIGLSATVGNPEELAKELGLKLVLYDERPVDLERHIIIARNESEKWR
HIANLCRAEAMRKSKQGYKGQTIVFTFSRKRTHELSAYLTSRGLRAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGKVYLIVEPGRKYSAQMEGTEEEVAFKLLTAPIEPVTVEWSDELEQDNVLAHSCVFNR
LDVIEEVQERCLGANQSAEKVLEKLEEFELVRLKKPLVEVTPYGRAVSMSFLLPKEAEFI
RRNLREKPARWIALKLHPFENLYLSGTLQRELEGAVRGRISANVFSPSFASILEELDKVI
PELSPNAAERLFTIYQEFFMCGEEDCTEYAMERVGNLIIELRRSGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAVERIARVFRVRRAEEEAKLLRREIEEGRIIRS
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgtaatcaggtccggaaggaagaagaacgagcttgaggccttctttatcgag
aacgagccagaaaagctgagcgagatgaagaacctgaaggctgacaggatattccgcctc
ataatgagagagggaaggctcttcaaggtcctggaggggagcaactaccgcaacccaaag
gagattgaaaagctccttcgccaggcgagaatcgttctcgtcaacgcggacgaatgggag
gactactttaagagaaggctccagaacaaaagagtggaaaaggccgagctgtgccgtctc
tgcctccttgagggcaggataacagtcctgacgcccggcaacaggataaagtaccgcaac
gagtacatctgcgagcgctgtgcggaggatgagctgaagagggagctcaggtttaggttt
aacagcatagcgatgttcgagcaggccaagaagctcctcgacaggtttagagacctcgat
aaggttttgtatgccttcgacccgcgcttcgacccgacgaagcacccggaagttaccaag
tgggacgagctgaaggccaagcacgtcaaggtcgagagggtcaaggttgacgagctcccg
cttccggagaggtttaaggaagttctgaaggccgagggcgtgaaggagctcctccccgtt
cagagcctggccgtcaagaacggcctccttgaaggggagaacttactcgtcgtttccgcg
actgcgagcggtaaaacgctaatcggcgaattagctggagtccccaaggcgatggagggc
aaaaagctcctcttcctggttccgctcgtggccctggcaaaccagaagtacgaggacttt
aggaggaggtactcaaagctcggtctccgcgttgccattcgcgttggcatgagccgtata
aagacccgggacgagcttgtggttgtggataccggaattgacgccgacatcatagtggga
acctacgagggaatagactacctgttgagagcaggaaggaagataggcaacgttggaacg
attgtggtagacgagatacacacgctcgacgacgaggagcgcgggccaaggctggacgga
ctgatagcccgcttgaggaggctttatccaaaggcccagttcataggcctgagcgctacc
gttggaaaccccgaggagctcgccaaggagcttggattaaagctcgtcctctacgacgag
aggccggttgatttggagagacacatcatcatagcgcgcaacgagtcggaaaagtggcgc
cacatagccaacctctgcagggcggaagcgatgagaaaatccaagcagggctacaagggg
cagacgatagttttcaccttctcaaggaagcgcacgcacgagctttcggcctacctcacg
agcaggggcctccgcgcgaagccctaccactccggtttgccctacaagcagaggaagctc
accgagatggagtttttagcccagaggctcgacgtcgtcgtcacgaccgccgcgctggga
gcgggcgtggactttccagcgagtcaggtcatcttcgagagcctcgccatgggcaacaag
tggctctctgttagagagttccaccagatgctcgggcgagctggaaggcccctctaccac
gagaagggtaaggtttacctcatagtcgagcccgggcgaaagtattctgcccagatggag
ggcaccgaggaggaggttgccttcaagctccttaccgcgccgatagagcccgtaactgtg
gagtggagcgacgagcttgagcaggacaacgttcttgctcattcctgcgtcttcaacagg
cttgacgttatcgaggaggttcaggagcgctgcttgggggccaaccagagcgccgagaag
gtcttggagaagctggaggagtttgagctcgtaaggctcaaaaagcccctcgtcgaggtc
acgccctacggaagggccgttagcatgagctttctgcttccgaaggaggctgagttcata
aggaggaaccttcgggagaagcccgcaaggtggattgcgctcaagcttcaccccttcgag
aacctgtatctaagcggaacgctccagcgggagcttgagggggccgtgagaggcaggata
agcgccaacgtcttctcgccgagcttcgcctccattctcgaggagctcgacaaggtcatc
ccggagcttagcccgaacgcggccgagaggctgttcacgatttatcaggagttcttcatg
tgcggtgaggaagactgcacagaatacgcgatggagcgcgttgggaacctcataatcgag
cttcgcaggagcgggaagcacccgacccagatagcggagcacttcaggaaggtttacggg
ctgatagtttacccgggcgacgtcttcacgtggttagatggcatcgtcaggaagcttgag
gctgttgagagaatcgcgagggtcttccgcgtgaggagagcggaagaagaggcaaagctc
ctcagaagggaaatagaggaggggagaattatccggagttaa
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