Thermococcus nautili: BD01_0827
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Entry
BD01_0827 CDS
T03065
Name
(GenBank) Ribosomal protein L9
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tnu
Thermococcus nautili
Pathway
tnu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
BD01_0827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnu03019
]
BD01_0827
03009 Ribosome biogenesis [BR:
tnu03009
]
BD01_0827
04131 Membrane trafficking [BR:
tnu04131
]
BD01_0827
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tnu04147
]
BD01_0827
Messenger RNA biogenesis [BR:
tnu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
BD01_0827
Ribosome biogenesis [BR:
tnu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
BD01_0827
Membrane trafficking [BR:
tnu04131
]
SNARE
SNARE associated proteins
Others
BD01_0827
Autophagy
Aggrephagy
Other aggrephagy associated proteins
BD01_0827
Exosome [BR:
tnu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BD01_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_22
TIP49
AAA_5
AAA_14
CDC48_2
AAA_33
nSTAND3
Vps4_C
RNA_helicase
AAA_28
AAA_24
IstB_IS21
NPHP3_N
Sigma54_activat
AAA_18
Mg_chelatase
ATPase_2
AAA_7
DUF815
Bac_DnaA
Parvo_NS1
ABC_tran
AAA_17
AAA_3
ATPase
NB-ARC
TsaE
SLFN-g3_helicase
PhoH
AAA_lid_PRS2_C
Zot
Hydrolase
DUF3952
COG3_C
Motif
Other DBs
NCBI-ProteinID:
AHL22449
UniProt:
W8PK29
LinkDB
All DBs
Position
725918..728431
Genome browser
AA seq
837 aa
AA seq
DB search
MIFGKGPERVDEVKLRVAEALKRDVGRGIVRFDRKYQRQLGVEPGDIVELVGERTTAAIV
ANPHPDDRGLDIIRMDGYIRRNAGVSIGDYVTVKRAEVQEAKKVVLAPAQKGVFIQIPGD
LVKQNLLGRPVVKGDLLVASNRSETYYGGSPFDDLLRGLFEAMPLGFGELKFVVVNTVPK
GIVQITYNTEVEVLPQAVEVREESIPEVTYEDIGGLSDAIQKIREMVELPLKHPELFERL
GIEPPKGVLLYGPPGTGKTLLAKAVANEANAHFIAINGPEIMSKFYGESEERLREIFKEA
EENAPSIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGLKSRGKVIVIAATNRPDAI
DPALRRPGRFDREIEVGVPDKQGRKEILQIHTRGMPLEPDYDKATVLRILREMKSKGSFD
EKKLESLIRRVEEARDEGEVKEALKSEGEIYAEVRSRLIDKMLEEIADKTHGFVGADLAA
LAREAAMVVLRRLINEGKISPEQEKIPPEVLQELRVRKEDFYEALKMVEPSALREVLIEV
PNVRWDDIGGLEDVKQELREAVEWPLKYPKAFERLGITPPRGILLYGPPGTGKTLLAKAV
ANESEANFIGIRGPEVLSKWVGESEKRIREIFRKARQAAPTVIFIDEIDAIAPARGAEGD
RVTDRLINQLLTEMDGIERNSGVVVIAATNRPDILDPALLRPGRFDRLVLVPAPDEKARL
EILKVHTRRVPLAKDVNLAELAKRTEGYSGADLEALVREAALIAMRRVMRELPSELVESE
SEEFLEKLKVSRRDFEEAMKKVKPSITPYMIDYYKNFEEGRKRKPERERGGVDYYTF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatattcggaaagggacccgagagggttgatgaggttaagctccgggttgccgaggcc
ctgaagagggacgtcggcaggggcatagttagatttgacagaaagtaccagaggcaactc
ggtgttgaaccgggcgacatcgtcgagctcgtcggcgagaggacgacggcagcgatagtg
gcgaatccgcacccggacgacaggggactcgacataatcaggatggatggctacattagg
aggaacgcgggggtgagcataggcgactacgtgactgtcaaacgcgctgaggttcaggag
gcgaagaaagtagtgcttgcaccggcccagaagggagttttcatccagattcccggagat
ttggtcaaacagaacctcctcggcaggcccgtcgtcaagggcgacctcctcgttgcaagc
aacaggagcgagacctactacggcggctcccccttcgacgacctgctgcgcggtctcttc
gaggcgatgcctctcggcttcggcgagctcaagttcgttgttgtaaacacggttcccaag
ggaatagtccagataacctacaacactgaagtggaggttctcccgcaggccgttgaggtc
cgcgaggagagcattccagaggtcacctacgaggacatcggtggcctgagcgacgcgatt
cagaagattcgcgagatggtcgagcttcccctcaagcacccagagctcttcgaaaggctt
ggaatcgagccgccgaagggtgtcctgctctacggtccgcccggaaccggtaagacgctc
ctcgcgaaggcggtagcgaacgaagccaacgcccacttcatagccatcaacggacccgag
ataatgagcaagttctacggcgagagcgaggagcgcctaagggagattttcaaggaagcc
gaggagaacgccccgagcataatcttcatcgacgagattgatgccatcgctccgaagagg
gaggaagtcgttggagaggtcgagaagagggttgtttcccagttgcttaccctcatggac
ggtctgaagagcaggggtaaggtcatagtcatcgccgcaaccaacaggcccgacgccatt
gacccggccctcaggaggccaggaaggtttgacagggagattgaggtcggtgtcccggac
aagcagggcaggaaggagatactccagatacacaccaggggaatgccccttgagccggac
tacgacaaggccaccgtcctcaggattctgagggaaatgaagtccaagggctccttcgat
gagaaaaagcttgaatcgctgattcgcagggttgaggaggcacgggacgaaggggaggtc
aaggaggccctcaagagcgagggtgaaatctacgctgaagtgcggagcaggctcatcgac
aagatgctcgaggagattgccgacaagacgcacgggttcgttggagcggacctcgcggcc
ctcgcaagggaagccgctatggtcgtcctgaggaggctgataaacgagggcaagataagt
cccgagcaggagaagataccgccggaggttcttcaggagctccgcgtcaggaaggaggac
ttctacgaggccctcaagatggtcgagccttcagcgctcagggaggttctcatagaggtt
cccaacgtccgctgggacgacattggaggccttgaggacgtcaaacaggagctcagagag
gcggtagaatggcccctcaagtacccgaaggcgttcgagaggctcggcataacgccccca
aggggcatactcctctacggtccgccgggaacgggtaaaacgctactcgcgaaggccgtg
gcgaacgagagcgaggctaacttcatcggaatccgcgggccggaagttctgagcaagtgg
gttggcgagagcgagaagaggataagggagatattcaggaaagcgagacaggcggctccg
acggtgatattcatagacgagattgacgcgatagcgcccgcgagaggtgctgaaggcgac
cgcgttacggacaggctcatcaaccagctgttgactgagatggacggcatagagcggaac
agcggcgtcgtggttatagcggcaacgaacaggcccgacatactcgacccggccctgctc
aggccagggcgctttgacagactcgtgctcgttccggcgcccgacgagaaggccaggctg
gagatactgaaggtccacacgaggcgcgtccccctcgcgaaggacgtcaaccttgctgag
ctggcgaaaaggactgagggctactccggtgcggacttggaagcgctggtgagggaagcg
gcactgatagcgatgcgcagggtcatgcgcgaacttccgagcgagctcgttgagagcgag
agcgaggagttcctcgagaagctcaaggtctcaaggagggacttcgaggaggccatgaag
aaggtcaagcccagcataacgccctacatgattgattactacaagaacttcgaggagggc
aggaagagaaagcccgagagggagcgcgggggcgtggactactacaccttctga
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integrated database retrieval system
