Thermococcus nautili: BD01_1037
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Entry
BD01_1037 CDS
T03065
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tnu
Thermococcus nautili
Pathway
tnu03022
Basal transcription factors
tnu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BD01_1037
09124 Replication and repair
03420 Nucleotide excision repair
BD01_1037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnu03021
]
BD01_1037
03036 Chromosome and associated proteins [BR:
tnu03036
]
BD01_1037
03400 DNA repair and recombination proteins [BR:
tnu03400
]
BD01_1037
Enzymes [BR:
tnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BD01_1037
Transcription machinery [BR:
tnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BD01_1037
Chromosome and associated proteins [BR:
tnu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BD01_1037
DNA repair and recombination proteins [BR:
tnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BD01_1037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHL22654
UniProt:
W8PKN8
LinkDB
All DBs
Position
complement(896124..898046)
Genome browser
AA seq
640 aa
AA seq
DB search
MQPDLQYFPYDTLRPNQAEFIELVRETAERGENAIIEAPTGFGKTVSVLAGVLPIAEELG
LKVLYLARTHRQMDRVIEELKAINRKARVSGVELRGRKELCLHNYLTQFTSDAYTAMVVC
KNLKKLGKCPFYENEKKKKAEFNELVNFFLESPSHPSEILSYAETLELCPYDLTRKIAEK
ADVIVASYLYAISPGIRESLISSLGVDYSDLIIVFDEAHNLPDQAISALSDRLSIHTLNR
AIKEADEYRENEIANFLSILGKGLELLFREKLADREIQETPIQPELVFVHLMRTLGISER
WLVKTLNEMVSIGEAIREDRIEKGKPPRSYIGRVGEFLLLWFSLIGREDYLFLLSREKGL
SLELVALDPSKALTFLREVHSAFFISGTLTPLEAFRDVMGIEKAKLKKFPRMVKRENAQV
LVAKDVSTRGEERSLQVYRKMVDYIVEAVKLIPKNVGVFTASYEVLQGLLSANLEVRLEG
TGKAVFIERQGVSSAENDTMVASFKAHAKGNGAVLLGVMGGRNSEGQDYSGDEMNGVILV
GIPYARPTPRVQAQIRYFERKFPGKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSIIILD
YRVLWRNVRKDFPDWMVETMRPVDLARMRLYLKRFWLSGP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagacctccagtactttccctacgacaccctcaggcccaatcaggcagagttc
atcgagctcgtgcgcgaaactgccgagaggggagagaacgccataatcgaggcacctacc
ggcttcggtaagaccgtgagcgttctggccggcgttcttccaatagctgaagagctcggc
ctcaaggttctctacttagcccgaacgcacaggcagatggacagagttatagaggagctc
aaggcgataaaccggaaggcgagggtttccggggttgagctcaggggcaggaaggagctg
tgcctccacaactacctcacccagttcacgagcgacgcctacaccgctatggtcgtctgc
aagaacctgaagaagctcggaaagtgccccttctacgagaacgagaagaagaaaaaggcc
gagttcaacgagctggtgaattttttccttgaaagcccttctcacccgtccgaaatcctg
agctacgcagagacgctcgagctctgcccctacgacctgacgaggaagatagccgagaag
gcagacgtcatcgttgccagctacctctacgcgataagcccgggcataagggagagcctg
ataagctcgctcggcgtggattattcggacctgataatcgtcttcgacgaggcccacaat
ctgccggaccaggccatctcggctttgagcgacaggctgagcatacacaccctcaacagg
gccattaaggaggccgacgagtacagggagaacgagatagccaacttcctgagcatactt
ggtaagggtcttgagttgctcttccgtgagaagctcgccgacagggaaatccaggaaacc
ccgattcagcccgagctggtcttcgtccacctcatgagaaccctcgggataagcgagcgc
tggctcgtcaaaacgctgaacgagatggtctcaataggcgaggcgataagggaggacagg
atagagaagggcaaacctccaaggagttatatcggtcgcgttggcgagttcctgctcctc
tggttctcgctcatcggaagggaggactacctcttcctgctcagcagggaaaaaggcctg
agccttgagctcgtggctttggacccatcgaaggcgttgacctttctcagggaagtccac
agcgccttcttcatctccggaacgctcaccccgcttgaggccttccgcgacgtcatgggc
atcgaaaaagctaagctgaagaagtttccgaggatggtgaagcgcgaaaacgcgcaggtt
ctggtcgccaaagatgtatcgacgcgcggtgaggagcgctcgctccaggtttacaggaag
atggtcgattatatcgtcgaggccgttaagctaattcccaagaacgtcggcgtcttcact
gcctcctatgaagtccttcagggcctcctctcggccaaccttgaggtcagacttgaagga
acgggaaaggcggtattcatcgagaggcagggggtgagctcggccgagaacgacacgatg
gtggcttcgtttaaagcccatgcgaagggcaacggggcggttctgctcggcgtcatgggc
gggaggaacagtgagggacaggattactctggcgacgagatgaacggggttatactggtc
gggattccctacgcgaggccaactccgcgcgtgcaggcccagataaggtacttcgagcgg
aagttcccgggaaagggccgctactacggctactacctgcccgcccacaggaaactggtt
caggcagccggaagggttcaccgctctgcggaggagaagggctcgataataatcctcgac
taccgcgtcctctggaggaacgtcaggaaggactttccagactggatggtggagactatg
aggcccgttgacctggcgaggatgaggctttacctgaagaggttctggctcagcggaccg
tga
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