KEGG   Thermococcus nautili: BD01_1187
Entry
BD01_1187         CDS       T03065                                 
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit-related helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tnu  Thermococcus nautili
Brite
KEGG Orthology (KO) [BR:tnu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tnu02048]
    BD01_1187
Enzymes [BR:tnu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BD01_1187
Prokaryotic defense system [BR:tnu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BD01_1187
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like Helicase_C MnmE_helical DEAD Abi_2 COOH-NH2_lig
Other DBs
NCBI-ProteinID: AHL22804
UniProt: W8PL87
LinkDB
Position
1034553..1037870
AA seq 1105 aa
MAMKPESVVHKEIADGLLKIGWENGNEKFGIEEHRLLTNVERLTLLGDVIIWDVLERKIK
ELNRSFFVNLTDEEEEKVWEEIKLKLESSDEVELLEALKYGLHLTALGKYDRIKLIDYEN
PDNNEFFFLHEAKYPGSPDNIKPDFSLFINGIPVVIIEAKAQGIIELDEIDWRRWAHVHG
TEEEALTQIRKYEKYSPRLFRFVQFAVAYGDKQVYTPTMPGKHYAPAFEWRYPNEDVSNI
FDLLAPERLLDVLRYFTFFFKRNEKGAKRIKVITRWNQYRATKRAIERITSYLSGNDEKS
NGLIWQWQGSGKTFIMFFIANWFLNNYKDRNPVVFFIVDRNDLEEQHSGVFQSVEDREFL
EHFDVIERINELRTRIEEMIKAEDTGRVIPTGLYIAKIQKFQYSKFKDMVKVRKVKGEER
FEAEKAVRKREVLFLVDEAHRTQYGRLASVMRALFPRAMFFGFTGTPIFKRSRNTFYEFA
YPKEGEYFLDVYFIKDSIRDGFTLDITHAIVEEEDVRLKIDENRLRAFMEAYENNDPEDF
EAFLLGKRKTLKMTSKELLEELRKSRVFLESPKEIERFAEYIAKRIYDDTMGFQFKAMVV
AVNRKACVHFKKALDKAFRNYFCSKIEELENEGRHEVAKHFRELCENAERLSEVVMTYPY
NEDDEDIIEFKRWLKTRREFQNKSYNEMNKVIVDWFREEEYPKVLIVTDMLLTGFDEPKL
RVMYLYKPIFEHRLLQAVTRVNRPYPGKETGLVVDAVGLWNAVIRVKGIYEMLAEQDPRV
LKDFERNFARSIEEKVKEFEDKLSDIKEELSAIGIEVELIKALRKQGRWEELEREINRVR
ETLAPIALAFKGNDPQAVRLLNDLREVVSLYRSLGAHRARLAYLEDMMAVGAVYSTFIRL
IGFTGKKSRFWDELLRFVHENMEVGPMREILQIKLGELSGTGSSFDTVARFYKLYYRAED
NSHDPVYKAILERLNKLLEQWLNRNIDLKTLAKEIKALESQADEYDKKRTERGWKESLVE
SVRFYLAKYMGLENVELKKFQRELKRLKRFTKGTSKKLSGALIQDIMSSIEADDNETYRR
ISREIDRLMEDSIIPAVRRYAGGRS
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggccatgaagcccgagtctgtggttcataaggagattgccgacggtcttctgaaaatc
ggctgggaaaacggcaacgaaaagtttggaatcgaggagcacagacttctgaccaacgtt
gagaggctaacccttcttggcgacgtgattatatgggacgttctggagagaaaaattaag
gagcttaacaggtcattctttgtgaacctcaccgatgaagaagaggagaaggtttgggaa
gagataaagctcaagcttgagtcctctgacgaagttgaacttcttgaggccctaaagtat
ggcctccacttaactgccctcgggaaatacgaccggattaaactcatcgactacgagaat
cccgacaacaacgaattcttctttctccatgaggctaagtacccgggctctcctgacaac
ataaagcctgacttcagcctgttcatcaacggtatccccgtcgtcataatcgaggccaag
gcccagggaataatcgagctcgatgagattgactggagaagatgggcccacgtccacggc
acggaagaggaagctttaactcagatacggaaatatgagaaatattcgccaaggctcttc
cgcttcgtccagttcgcggtcgcttacggggataagcaggtttacactcccacgatgccc
gggaagcattacgctcccgccttcgagtggaggtacccgaacgaggacgtttcgaacatc
ttcgacctcctggcccctgaaaggcttcttgacgtcctccgatacttcacgttcttcttc
aagagaaacgagaagggcgcaaagaggattaaggttatcacccgttggaaccagtatcgg
gcgacgaagagggccattgaaaggattaccagttacctttccggcaacgacgagaagagc
aacggtttaatctggcagtggcagggaagcggaaagactttcataatgttcttcatcgcc
aactggttccttaacaattacaaggacaggaaccccgtcgttttcttcattgttgacagg
aacgaccttgaggagcaacactcgggcgttttccaatccgttgaggacagggagttctta
gagcattttgatgttatcgagagaattaacgagctcaggacgaggattgaggagatgata
aaggccgaggacactggaagggttattcccacagggctttacatcgcaaagattcagaag
ttccagtactccaagttcaaggacatggtcaaggttcggaaggttaagggggaagagcgg
ttcgaggcagagaaggccgtcaggaagcgggaggttctctttctcgttgatgaggcccac
agaacccaatacggccggcttgcctccgtcatgcgtgccctcttcccgagggcaatgttc
ttcggcttcaccggaacgccgattttcaagaggagtaggaacaccttttacgagttcgct
taccccaaggagggtgagtacttcctcgacgtttacttcatcaaggactccattagggac
ggctttaccctcgacataacccacgccatcgtcgaagaggaagacgtgagactcaagatt
gatgagaaccggctgagagcctttatggaggcttacgagaacaacgaccccgaggatttc
gaagcgttccttctggggaagaggaagaccctcaaaatgacgtcaaaggagttgcttgag
gagctgaggaagtcaagggtcttccttgagagtcccaaggagattgagcgcttcgccgaa
tacatcgccaagcggatttacgacgacacgatgggctttcagttcaaggcgatggttgtc
gccgtcaacagaaaggcctgtgtgcacttcaaaaaggcccttgataaggcgtttaggaat
tacttctgctcgaaaattgaagagcttgagaatgaaggcagacatgaggttgccaagcac
ttcagggagctttgcgagaacgctgaaaggctttccgaggttgtcatgacgtatccttac
aacgaggacgatgaggacatcattgagttcaagcggtggctcaaaaccaggagggagttc
cagaacaagagttacaatgaaatgaataaggtcatcgtggactggttcagggaggaagag
tatccaaaggtcctcatcgttacggacatgcttctcacgggctttgacgagccaaagctg
agggtgatgtacctttacaagccgattttcgagcacaggctccttcaggccgttacgaga
gtgaaccgaccataccccggcaaggaaacgggccttgtcgttgatgccgttggcctctgg
aacgcggtgattagggtcaagggaatttatgagatgctggccgagcaggatcccagggtg
ctcaaagactttgagagaaacttcgccaggagcatcgaagagaaggtgaaggagttcgag
gacaagctttcagatatcaaagaggaactttctgcgattgggattgaagttgaattgata
aaggcactcaggaagcaggggcggtgggaagagcttgagcgggaaattaacagggtgagg
gaaaccctggccccaattgcactggcgttcaagggcaatgacccgcaagcggtcaggctc
cttaacgacctcagggaagtggtttccctttaccggtccctcggtgctcatcgggcgaga
ttagcttatcttgaggacatgatggcagtgggagcggtgtattcaacgttcatacggcta
atcggattcactggaaagaagagcaggttctgggacgagttgcttcgctttgtccacgag
aacatggaagttggtccaatgagggaaatcctccagattaaactgggggagctctctgga
acaggttcttcgtttgatactgtggctcggttttacaagctgtattaccgggccgaggac
aactctcacgacccggtgtacaaggccattcttgagcgcttgaacaagctccttgagcag
tggctcaacaggaacattgacctgaagactcttgcaaaggaaataaaggcccttgagagc
caggcagatgagtacgataaaaagagaaccgagaggggatggaaagagtccttggtcgaa
tcggtcaggttttatcttgccaaatacatgggactggaaaacgttgagctgaagaaattc
cagagggagctaaaacggctcaagcggttcacaaagggaacgagtaagaagctttctggg
gctcttattcaggatattatgagttcgattgaagcggatgacaatgaaacgtaccgcagg
atttcaagggagattgacaggttgatggaggactcaataattccagcggtgcggaggtat
gctggaggacgttcttga

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