Thermococcus nautili: BD01_1239
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Entry
BD01_1239 CDS
T03065
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tnu
Thermococcus nautili
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tnu03016
]
BD01_1239
Enzymes [BR:
tnu01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BD01_1239
Transfer RNA biogenesis [BR:
tnu03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BD01_1239
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AHL22854
UniProt:
W8PLD3
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All DBs
Position
1074690..1075196
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AA seq
168 aa
AA seq
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MIVFYLSGDRVFSTDQNAINGLYNKRHFGKLVEGKLFLSLLEATYLVERGKIEVRDGKRK
LTVEELMNLGRKRDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMDEHSQWLVW
VLPENSRLSPNDITARVRVAHGVRKNMVMAIVDEDADVTYYKVEWTKF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcttttacctgagcggggacagggtcttctcgaccgaccagaacgcgataaac
ggcctctacaacaagcgccacttcgggaagttagtcgagggcaagctcttcctctctctc
cttgaagccacctacctcgtcgagaggggcaagatagaggtcagggacgggaagagaaag
ctaaccgtagaggagctcatgaacctcgggaggaagagggacgagctgttcgacgccaag
tacctcgtctacaaggacctgcgcgacaggggctacaccgtcaagtccggcctcaagttc
ggctcgcacttccgggtttacaggcgtggaatggacgagcactcccagtggctcgtgtgg
gtcctgcctgagaactcccgcctgagcccgaacgacataaccgctcgcgttagagtagct
cacggtgtcaggaagaacatggtgatggcgatagtggatgaggacgcggacgttacatac
tacaaggtcgagtggacgaagttctga
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