Thermococcus nautili: BD01_1715
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Entry
BD01_1715 CDS
T03065
Name
(GenBank) TATA-box binding protein (TBP), component of TFIID and TFIIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tnu
Thermococcus nautili
Pathway
tnu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BD01_1715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnu03000
]
BD01_1715
03021 Transcription machinery [BR:
tnu03021
]
BD01_1715
Transcription factors [BR:
tnu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
BD01_1715
Transcription machinery [BR:
tnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
BD01_1715
RNA polymerase III system
TFIIIB
BD01_1715
RNA polymerase I system
SL1/TIF-1B
BD01_1715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Csa3_N
DDE_Tnp_1_assoc
Motif
Other DBs
NCBI-ProteinID:
AHL23318
UniProt:
W8NVL9
LinkDB
All DBs
Position
complement(1498388..1498960)
Genome browser
AA seq
190 aa
AA seq
DB search
MVDMSNVKLRIENIVASVDLFTELNLEKVIEICPNSKYNPEEFPGIICRFDEPKVALLIF
SSGKLVVTGAKSVEDIERAVNKLIQMLKKIGAKFHRAPQIDIQNMVFSGDIGMEFNLDAV
ALSLPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEHDAWEAVRKLLRELEK
YGLIEEEEEW
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttggtggacatgagcaatgtaaagctcaggattgaaaacatcgtcgcttctgttgacctc
tttacggagctgaaccttgagaaggttattgaaatatgccccaactcgaagtacaacccg
gaggagttccccggaatcatctgtcgcttcgatgagccgaaggttgccctgcttatattc
agctccgggaagctcgtcgttacaggtgctaaaagcgtcgaggacatcgagagggccgtc
aacaagctcatccagatgctcaagaaaatcggcgccaagttccaccgcgctccccagatt
gacatacagaacatggtcttcagcggtgacatcggcatggagttcaacctcgacgcggtc
gctttgagcctgcccaactgtgagtatgaacctgagcagttccccggtgtcatctaccgt
gtgaaggagccgagggcggtgatactgctcttctcctccggtaaaatcgtctgctcaggc
gccaagagcgagcacgacgcctgggaggccgttaggaagctcctccgcgagcttgagaag
tacggtctaatcgaggaagaggaggagtggtga
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integrated database retrieval system
