Thermococcus nautili: BD01_1951
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Entry
BD01_1951 CDS
T03065
Name
(GenBank) Transcription initiation factor IIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tnu
Thermococcus nautili
Pathway
tnu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BD01_1951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnu03021
]
BD01_1951
Transcription machinery [BR:
tnu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
BD01_1951
Prokaryotic type
Archaeal type
TFE
BD01_1951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
HTH_Crp_2
TrmB
HTH_IclR
HTH_5
Sigma70_r3
Sdh5
Zn_Ribbon_TF
GntR
HTH_DeoR
Rad50_zn_hook
Sigma70_r4_2
HTH_23
PLC-beta_C
Rrf2
WHD_MCM8
Mnd1
HTH_3
Cas12f1-like_TNB
HTH_36
HTH_29
RepL
DUF2250
HTH_Cmi2_C
HTH_24
Prefoldin_2
Motif
Other DBs
NCBI-ProteinID:
AHL23553
UniProt:
W8NW80
LinkDB
All DBs
Position
complement(1709399..1709938)
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AA seq
179 aa
AA seq
DB search
MARRKNKELIEIAMDIGGEEAVEVVKALEKMKEATDEELAEKTGIRVNTVRRILYQLNDQ
GLADFKRIRDPETGWYYYYWRLETKRLPEIIKARKMAELKRLKEMLEEETSEIYYWCGEE
GHPRLTFDEAMEYEFQCPICGKMLMQYDNSRIVEELKKRIEELEIELGLRKKPRKKKSG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagacggaagaacaaggagctcatcgaaatcgcaatggacataggcggtgaggag
gccgttgaggtagtcaaagccctcgaaaagatgaaggaagccacagatgaggaactcgcc
gagaaaacggggataagagttaataccgtcaggagaatcctttaccagctcaacgaccag
ggactggcagatttcaagagaatccgcgaccccgagacgggatggtattactactactgg
cgccttgagaccaagagactgcccgagataataaaggcccgaaagatggccgagctgaag
aggctcaaggagatgcttgaggaagaaaccagcgagatttactactggtgcggcgaggag
ggccatccgaggctcaccttcgacgaagcgatggagtacgagttccagtgcccgatatgc
ggtaagatgctcatgcagtacgacaacagtcgaattgtcgaggagctcaagaagcgcata
gaggaactcgaaatcgagctcggcctcaggaagaagccgaggaagaaaaagagcggttaa
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