Thermococcus nautili: BD01_2138
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Entry
BD01_2138 CDS
T03065
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tnu
Thermococcus nautili
Pathway
tnu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BD01_2138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnu03400
]
BD01_2138
Enzymes [BR:
tnu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BD01_2138
DNA repair and recombination proteins [BR:
tnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BD01_2138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
DUF2345
Motif
Other DBs
NCBI-ProteinID:
AHL23734
UniProt:
W8PNZ4
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All DBs
Position
1872221..1873066
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AA seq
281 aa
AA seq
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MFKVDRLRFGTAGIPLSTPKRSTIDGIIHVRNLGLDAMELEFVRGVNLKPELAKKIKYVA
KKHDVLLTAHAPYYINLNASEKAKVEASKRRIIQSAERLYDAGGWSVVFHAGYYLKQDPA
KVYNRIRDALKEIERELLDRGVKVWLRPELTGKPTQFGDLKEIVKLSEELETVLPTIDFA
HAHARNRGKCNSVEEWREMLAFIEDRLGREALDNMHIHMSGIEYTEKGEKRHLPLQESDM
KWEDLLRVLKEFRVKGVVISESPNIEEDALLMKKKYEEIKV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtagacaggttgcgtttcggaaccgctggaataccgctctcaacgcctaag
cgctcaacgatagacggcataatccacgtgaggaacctcgggttggatgcgatggagctg
gagttcgtcaggggcgtcaacctcaagcccgaactcgcgaagaaaatcaagtacgtcgcc
aaaaagcacgacgtcctgctcacggcgcacgccccttactacatcaacctcaacgcgagc
gagaaggcaaaggtcgaggcaagcaagaggaggataatccagagcgccgagaggctttac
gacgccggtggatggagcgtcgtctttcacgccggttactacctcaagcaggaccctgcg
aaggtctacaacagaatcagggacgcgctgaaggagattgagagggaactcctggacagg
ggcgtcaaggtctggctcaggcccgagctgaccggaaagccgacccagttcggcgacctt
aaggagatagtgaagctcagcgaggagcttgagacggttcttccgacgatagacttcgcg
cacgcccacgcgaggaaccggggcaaatgcaactccgttgaggaatggcgtgagatgctg
gcctttatcgaggacaggcttggcagagaggccttagacaacatgcacattcacatgagc
ggtatcgagtacactgagaagggggagaagaggcacctcccgctccaggagagcgacatg
aagtgggaggacctgctcagggttctgaaggagttccgcgttaagggcgtcgtcataagc
gagagccccaacatcgaggaggacgcgcttctgatgaagaagaaatacgaggagataaag
gtttag
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