KEGG   Thermococcus nautili: BD01_2211
Entry
BD01_2211         CDS       T03065                                 
Name
(GenBank) Signal recognition particle GTPase
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tnu  Thermococcus nautili
Pathway
tnu02024  Quorum sensing
tnu03060  Protein export
tnu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BD01_2211
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BD01_2211
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BD01_2211
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tnu02044]
    BD01_2211
Enzymes [BR:tnu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BD01_2211
Secretion system [BR:tnu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BD01_2211
  Eukaryotic Sec-SRP protein
   BD01_2211
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin AAA_17 MobB Glyco_transf_4 cobW AAA_16 nSTAND3 AAA_30 Fe-ADH AAA_33 MeaB LpxK NPHP3_N APS_kinase NTPase_1 ATP_bind_1 IMPDH AAA_18 Thymidylate_kin Glyco_trans_4_4 YjeF_N ParA YqeC KTI12 AAA_31 Hydrolase MMR_HSR1 NACHT AAA_7 ResIII
Other DBs
NCBI-ProteinID: AHL23801
UniProt: W8P4R7
LinkDB
Position
complement(1912941..1914287)
AA seq 448 aa
MALEKLGKALNNALRKLARSGTVDEATIKEVVRDIQRALLQADVNVKLVLQLTKTIQKRA
LEEEPPAGVSRKEHIIKIVYEELTKFLGTEAKPLEIKEKPTVLLTVGIQGSGKTTSVAKL
ARHLQKRGYKVGVVCSDTWRPGAYHQLRQLLDSYGIEVFGDPNEKDAVKLAREGVEHFRE
KGVDVIIVDSAGRHKEEKGLIEEMKQISEAIKPHEVILVIDGTIGQQAYNQALAFKEATP
IGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGDIQ
GLLEKIEELQKQQEFKEEDVEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGYSL
PDEAIRVGEEKLKRYRVIMDSMTEEELEHPEIINYSRIKRIARGSGTSTSEVRELLNQYN
QMKKMFKSMNKRKLAKMAKKFNLGGFGV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcgttagaaaaacttgggaaggcccttaacaacgccctcaggaagctcgcgcgctcc
ggaacagttgacgaggcgacgataaaggaggtagttagggacatccagagggcactcctg
caggcggacgtcaacgtcaagctcgttcttcagctcacgaaaacaatacagaagagggcc
ctcgaggaggaaccgccggcgggcgtcagcaggaaggagcacataatcaagatagtctac
gaagagctcacgaagttcctcggaaccgaggcgaagccccttgagataaaggagaagccg
accgttttgctcaccgttggtattcagggttctggaaagacgacgagcgtggcaaagctg
gcgaggcaccttcagaagaggggctataaagtgggcgtcgtctgctccgatacctggcgt
cccggagcgtaccaccagctcagacagctcctcgactcctacgggatagaggtcttcggc
gaccccaacgagaaggacgcggtcaagctcgcaagggaaggggttgagcacttccgcgag
aaaggagttgacgtcataatcgtggactccgccggaaggcacaaggaggagaagggcctc
atcgaggagatgaagcagataagcgaggccataaagccccacgaggtcatactcgtcata
gacgggaccatcggccagcaggcctacaaccaggcgctggccttcaaagaagccactcca
ataggctcgataatcgtcacgaagctcgacggttcggccaagggcggtggagcgctttcc
gccgttgccgcaacgggggcgccgattaagttcatcggtgtcggcgagaggatagacgat
ttggagccctttgaccccaagcgcttcgtttcaaggcttctcggccttggagacatccag
ggactccttgagaagattgaagagctccagaagcagcaggaattcaaggaagaggacgtt
gagaagttcctcaagggcaagttcaacctcaaggacatgtacgcccagctcgaggcgatg
cagaagatgggcccgctcaagcagatactccagatgattcccggccttggctattcgctc
cccgacgaggcaattcgcgttggggaggagaagctcaagaggtaccgcgttataatggac
tcgatgacggaagaagagcttgagcatccggagataatcaactactcccgcataaagagg
attgcccggggttcgggcacaagcacgtctgaagtcagagagcttttaaaccaatacaac
caaatgaaaaagatgttcaagagcatgaacaagaggaaattagctaagatggccaagaag
ttcaacctcggggggttcggggtatga

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