Temnothorax nylanderi: 139767610
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Entry
139767610 CDS
T11678
Symbol
Cpsf73
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tny Temnothorax nylanderi
Pathway
tny03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139767610 (Cpsf73)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tny03021
]
139767610 (Cpsf73)
03019 Messenger RNA biogenesis [BR:
tny03019
]
139767610 (Cpsf73)
Transcription machinery [BR:
tny03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139767610 (Cpsf73)
Messenger RNA biogenesis [BR:
tny03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139767610 (Cpsf73)
U7-dependent histone pre-mRNA processing factors
139767610 (Cpsf73)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
139767610
NCBI-ProteinID:
XP_071553158
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSSKRKSDAQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLLKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLEASMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHSELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDSKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
APRPGQKLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQI
AGSLEVVDDKKLRVFKNVDVTIDGRIVTMEWIATPVNDMYADSVLTAILQAEIMDQSPKV
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKE
DETFQQIVQTAVTKLHQSLAPPCDVI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaagagaaagagcgacgcgcaagtgccggccgaggagagcgatctgctctcg
atccggccgctcggcgcgggccaggaggtcggcaggtcgtgtatcatgttagaattcaaa
ggtaagaaaattatgctggactgcggcatacatcccggtctatcgggcatggacgccctg
ccgttcgtcgacctcgtcgaggccgacgagatcgacctgctgctgatctcccactttcac
ctggaccactgcggcgcgctgccctggtttctgctgaagacgagcttcaagggtcgttgc
ttcatgacgcacgccaccaaggccatttatcgctggctactgtcggactacatcaaggtg
agcaacatcgccaccgagcagatgctgtacacggagtccgatctggaggccagcatggac
aagatagagacgatcaacttccacgaggagaaggacgtgttcgggatcaagttctgggcg
tacaacgccggccacgtgctgggcgccgctatgttcatgatagagatcgccggcgtgaag
atcctgtacacgggggacttcagccggcaggaggaccggcacctgatggccgccgagatc
ccgaacattcatcccgacgtgctgatcacggagtccacctacggcacgcacattcacgag
aagcgggaggatcgcgagggcagatttacgaatctcgtgcacgagatcgtcaacaggggc
ggcagatgcctgatacccgtgttcgctctgggaagggcgcaggagctcctcctcattctg
gacgagtactggagccagcattcggagctccacgagataccgatctactacgcctcctcc
ttggcgaaaaagtgcatggccgtttatcagacatacgtgaacgccatgaacgacaagatc
agacggcagatagctatcaataatcctttcgtgttcaagcacatttctaatttgaagggg
atagatcacttcgaggatatcggaccgtgcgtggtgatggcctcgcccggtatgatgcag
agcggcttgtcgagggagctgttcgagtcctggtgcacagattcgaaaaacggggtgata
atagccggctactgcgtggagggaacgctggcgaagacgattctgtcggagccggaggag
attacgactatgtccgggcaaaagttaccgttgaagatgtccgtcgactacatatcgttc
tcggctcacaccgattaccagcaaacctcggaatttatacggattttgaagccgccgcac
gtggtgctggtgcacggcgagcagaacgagatgggcaggttgaaagcggcattgcaacgg
gagtacgaggacgatcccaacaccaccatggagatacacaatccgcgaaacacggtcgcg
gtggagctctacttcaggggcgagaagaccgccaaggtgatgggcacgctggcgatggag
gctcctagaccggggcagaagttatccggcgtgttggtcaagaggaacttcaattatcac
atgctagccccgtgcgacctgtccaagtacacggacatgagtatgagccaagttatacag
cggcagagcgtgtacttctccgcgtctttgccagtgttgaagcaccttctgacgcagata
gccggcagcctggaggtcgtggacgacaagaagctgagggtattcaagaacgtcgacgtc
acgatcgacggcaggatcgtcacgatggagtggatagcgacgccggtgaacgacatgtac
gcggattccgttctcacggcgatcctgcaggccgagataatggaccagtcgccgaaggtg
ttgcccgcgcccaccaaaatggacaggatgcactttaaggagtgcctcatagagatgctg
caggagatgttcggcgaggattccgtgcccaagatattcaaaggagagaaactctatgtc
acggtagacggtaagaaagcgcatatagacctgctgaacttggaggtgaccagcaaggag
gacgaaactttccagcaaatagtgcaaacagcggtgacgaaattgcatcagtcgttggcg
ccgccttgcgatgtaatatag
DBGET
integrated database retrieval system
