Temnothorax nylanderi: 139767639
Help
Entry
139767639 CDS
T11678
Symbol
Srrm1
Name
(RefSeq) uncharacterized protein Srrm1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tny Temnothorax nylanderi
Pathway
tny03013
Nucleocytoplasmic transport
tny03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139767639 (Srrm1)
03015 mRNA surveillance pathway
139767639 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tny03019
]
139767639 (Srrm1)
03041 Spliceosome [BR:
tny03041
]
139767639 (Srrm1)
Messenger RNA biogenesis [BR:
tny03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139767639 (Srrm1)
Spliceosome [BR:
tny03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
139767639 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
139767639
NCBI-ProteinID:
XP_071553207
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVLKPWITTKITQILGME
DDVVVEFVYNQLDEKFPDPRKMQINLTGFLNGRNARSFMCELWDLLVSAQESVTGIPEAF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDDADSKVKKEEKDRGSSKERRRDRS
RDRDRDRSKRSRSRDRHRDRDRSSRKRRSVSRSPSKNSKDNGKDMLEVKVEREDSPQPDN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESLEKSARKSRSGSPLFEQS
RSKKSKSKSPSRDSKTRRSRSPVSKSRRSRSKSRSRRSRSKSRRSKSRSQDRTKSKRSKS
KSPRSRSRSRSKKSRSKSEDRSKSRKSRSDSSDSRSSKSRSKSPEKQKDTGESNRKRDGS
TSSSSESEEEKDAKDKNDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRERKSAPKRRS
PSPRKDRGRSKDRDRNRSRDRSRDRSQDRSRDRSRSRDRNRRRSLDRDRDRRRERERERE
RERERLDRYSGSRSMRPPSVRRPPNRRSSPPRRSPARYRRRSPSPEDRRRRRSLDRRRRS
SERRDRRRSPDQRGSRRRSPDGRDRSSRYDRSSSRDRSSRRDRSRERRDKDRRSRSKDRR
SRSKDQRSSVDRSRDGKRSPDRAKGTKDKTKDRKVDEKTKRPPDTGSRKELRNGRSKSSS
SESSESSSSSNEDESLRKSIERKTPQEKREREREHTDDAKKKEKEKTVKEEPAKRPEKEI
KKIEPVAAKKPEPSVSPKKLQATSLPVTRHRFSKSLSRTPSPFKKTEDIVAIAAKIKQTI
KEDTKDESPMKVGDMNFTAADAFPLKKDEKSLKTTKLVTEDKKSTQKPLEPPSKKPAEMA
KKTKREKRDGSTDSEDSDGEGKRKVKKIEKSKKSKKASTDEDKSDKSKAGSSSDSEDDRK
HSDKNKKAKDTSRTDSVDDRNKDRKDSRKREVAENDSRKRSRKEIEEELKKSKRSRKDSS
SGEEEQKSKKSRNEDDRSRSRKSKKDSSSDEEPKKVKKRRETSSDDEKSKSRKSRKDSTS
EDETKSKSKKSKRDSSSEDDELGDKDSKKKKKVDDSSDDEKVKKKRKKKAKTSTSESEES
EVEEKKKKKEKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKSMKK
GHSIERSD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagggacaactgcttcgcaggacaccaggttcagcgacaaggagaagaag
cttctaaagcaaatgaagtttggagattcattgacacaaaaagtggatatgagcaaagtg
aaacttgatgtgcttaagccatggatcacgacgaagatcacgcagattctaggaatggaa
gacgacgtggtggtagagtttgtgtataatcaacttgacgagaagttccctgacccccga
aaaatgcagatcaacctgacaggcttcctcaacggtaggaatgcccgttctttcatgtgt
gaattatgggaccttctggtctctgctcaagaaagtgttacgggcattcccgaggcattc
ttgcaacaaaaaaaagatcaaattaaaaaacgtttggaagagcaagagaagcttcaagca
tcgttggcggagaaagagaaagaaaaggagcgtgaaaaagaaaaggatgacgctgatagt
aaagtgaagaaggaagagaaagatagaggctcatcgaaggagcgtagaagggatcgaagt
agggatcgtgatagagacaggagcaaaaggagtagatcgcgggatcgacacagagatcgc
gatcgatcgagtcgtaagagaagatctgtttcaaggtcgccgagtaaaaattcgaaggat
aacggaaaagatatgctcgaggttaaggtcgaacgagaagattcgccgcaaccggacaat
gctatacctctgatgccagttaaaaccaagccggaagccgcagtagcaatatcaagattg
caagccaagttgatgagcattgctgatggaaagaagaagaacaatcgcacaccgtcacca
gaatcgttggaaaaatcagcaaggaaatcgcgatctggatcgccgttgttcgaacagagt
cgttcgaagaaatctaaatcgaagtcacctagtcgggattcgaagacacgtcgatcacga
tcgcctgtttcgaagtcgagacgatctcgttccaagtcgagatctaggagatctcgatct
aaatcccggagatcaaagtcgcgctcgcaggaccgtaccaagtccaagcggagcaaatcc
aaatcgccgagatcacgatcacgatcgcgatccaagaagtctcgatctaagagcgaggac
aggagcaagtcgagaaaatcgaggtccgactcgagcgactcgagatcctccaagtcccgc
tcgaagtctccggagaaacagaaggacactggagagtccaatagaaaacgcgacggtagt
actagcagcagctctgaatccgaggaggagaaagatgcgaaggataagaacgacttcgag
atacgaaagaagaaggatggcgtgcaagctaaaagatcctacaggaaaaccaacaaagat
gatagtggcagtgatagcgactctagtcgggagagaaaatccgctcctaagcgaagaagt
ccttcgccgcgtaaggataggggtcgatctaaagacagagacagaaacagatcacgagat
agatcacgagaccgatcgcaagatagatcgcgagatagatcacgatcacgagatagaaac
cgaaggagatcattggaccgggatcgcgataggaggcgggagcgagaacgcgaaagggag
agggaaagggagagattggaccgatacagcggcagccgcagcatgcgaccaccttcggtg
cgcagaccgcctaataggcgcagcagtccaccacgcagaagtccggcgagatatcgtcgt
aggtcaccgagccccgaggacagacgtcgcaggagatcgctggatcgtcgaagacggtca
tcggagagacgtgacaggcgccgttcgcccgatcaacgtggaagccgacgtcgttcgccg
gacggacgggaccgatcgagcaggtacgatagatcttcctcgcgcgacagatcgagtagg
cgggatcgctccagagaacgacgggataaggatcgtcgatctagatctaaggatcgtaga
tcgagatccaaggatcagagatcatcggtggatcgttcgagagacgggaagcggtctccc
gatcgtgcaaagggtaccaaggataagacaaaggacaggaaagtggatgagaaaactaaa
agaccgcctgatacaggatcgcgaaaagaattacgaaatggccggtctaagtcgagtagc
tcggaaagtagcgagagtagttcctctagcaatgaggacgaatcacttagaaaatcaatc
gagcgcaaaacgccgcaggagaagcgagaaagagaacgtgaacatacggatgatgccaag
aagaaagagaaagagaaaacggtgaaagaagaacctgctaagcgaccggagaaagaaatt
aagaagatagaacctgttgctgcgaaaaagcccgagcccagtgtttcccccaagaaactt
caagctacttcactacctgttaccagacatagattctcgaagagtttgtcgcgtacaccc
tcgccgttcaagaagaccgaagacattgtggcaatagcagccaaaattaaacagacgatt
aaagaagacactaaggacgaatcaccaatgaaggttggagatatgaattttactgctgca
gacgctttccctctaaagaaagatgaaaagtctttgaaaacaacgaaattagtaacagaa
gacaaaaagtctactcaaaagccgttggaacctccatccaagaaacctgcagaaatggct
aaaaagacgaagagagaaaagcgtgatggttctacagatagtgaagatagcgatggtgaa
ggcaagagaaaagtgaaaaagatagaaaaatcgaagaagtcaaagaaagcttcgacggat
gaagataaatctgataagagcaaagctggatcgagctcagactctgaggatgacagaaag
cattcagataaaaacaaaaaagctaaagatactagccgaaccgattcagtggatgatcgt
aataaagatagaaaggatagtaggaaacgcgaggttgctgagaatgattcgcgaaagcgt
tcaagaaaggaaatagaggaagaattaaaaaaatcaaaaagatcacgaaaggactcttct
tcgggtgaagaagagcagaaatctaaaaaaagtagaaatgaagatgatagatcaagatct
cggaaatcaaagaaagactctagttctgacgaagaacctaaaaaagtgaaaaagaggagg
gagacatcatcagacgatgaaaagtctaagtcgcgaaagtccagaaaagattcgacaagt
gaagacgaaactaaatcaaaatcaaagaaatctaaacgagattccagctcagaagatgat
gaacttggagataaagattcgaagaagaaaaagaaagttgacgacagttcggacgacgaa
aaggtgaaaaagaagcgtaagaaaaaggcaaaaaccagcaccagcgaatcggaggaaagc
gaagtcgaagagaagaagaaaaagaaggagaagaaacacaagaagcacaagaagcataag
aagcacagaaagcacaagaagaagaaggttgcggattcagatgaatctgatgtaagtgaa
ggtaatacggaagaactggaaaagaaacttcgggaaaaagcattaaagtctatgaaaaag
ggacatagcattgaacgaagtgattga
DBGET
integrated database retrieval system
