KEGG   Temnothorax nylanderi: 139767956
Entry
139767956         CDS       T11678                                 
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tny  Temnothorax nylanderi
Pathway
tny03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tny00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139767956 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tny03021]
    139767956 (Taf5)
   03036 Chromosome and associated proteins [BR:tny03036]
    139767956 (Taf5)
Transcription machinery [BR:tny03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139767956 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     139767956 (Taf5)
Chromosome and associated proteins [BR:tny03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139767956 (Taf5)
    STAGA complex
     139767956 (Taf5)
    TFTC complex
     139767956 (Taf5)
    SAGA complex
     139767956 (Taf5)
    SLIK complex
     139767956 (Taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_IFT122_1st TFIID_NTD2 WD40_Gbeta Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C DSE1_N CFAP251_N ANAPC4_WD40 PAC11 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR41 WD40_RFWD3 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 ASA1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_NOL10_N Tricorn_2nd Beta-prop_RIG_1st Beta-prop_DCAF12 WDR54 Beta-prop_HPS5 Cytochrom_D1 TRM82_WD DUF5713
Other DBs
NCBI-GeneID: 139767956
NCBI-ProteinID: XP_071553825
LinkDB
Position
Unknown
AA seq 652 aa
MDNEKSTMIAVLQLLKKYNFKGTEELFRKEANLTDVSIDDAQQSDSDVTSVLSAYKSEGD
PAQYEKAYIELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSKEAKQLMEKFSGN
LEEYYQEDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGALVGEATRQDNKSKVFYGLLKEPDIQPPAEEEE
KCDDTGGGDGDKPKKKKVKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKIKALREA
SKRVVLGPDTLPSICFYTMLNTTYTITAAEIAEDSSLLATGFSDSGIKVWSLLPQKLRVM
KTGEQLQDITREAEDVLVRMMDDRTSETARHLYGHSGPIYSLSFSPDRNLLLSSSEDTTI
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFASASNDKTARLWATDSHQPLRIFAGHY
SDVDVIQFHPNSNYVASGSSDMTVRLWDCVTGNQVRLMTGHKEPIFSLAFSIEGRFLASA
GADHRVLMWDLAHGHLVAALSGHTANIHCLSFSRDGNILVSGSLDYTLKLWDFTKLAEEM
SLEDVNVSHNPDVKSNSESYLLRTFPTKNSSVLALHFSRRNLLLGVGMFDSG
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggataacgagaagagtactatgatcgctgttttgcagcttttgaagaagtataatttc
aagggaaccgaggaattgtttagaaaggaagctaatctcaccgatgtctcgattgacgac
gctcagcaatctgattccgatgtgaccagcgtcctttccgcttacaagagcgagggagat
cctgcgcaatatgagaaagcatacattgaattgaaaaagtttgtagaaggagctttggac
atttataagcatgagttgggaaccatattgtatccagttttggtgcacatgtatttggaa
ttggtttataataatcattccaaagaggcgaagcaactcatggagaagttcagtggaaat
ttagaagagtattatcaggaggacttgaagagattgtccaatgtaacaaaacgagagcaa
atggcagggaatgaattaactgacacttttaaatctaatcagtttataatcagaatgtcg
agggataccctttcaatactaaaacgacatttgcaagaaaagaaacatagcgttttacta
aacatcatacaggagcatctttactttgatatgtatgagggcgttgctcgtaataaacaa
cagatagaagcaacgtctggagctctagtgggagaggctaccaggcaagataacaagtcc
aaagtattttatggacttctaaaggaacctgatattcagccaccagccgaagaagaggaa
aagtgtgatgacacaggtggtggagatggagacaagccgaagaagaaaaaagtaaagaaa
gatcctttgttttcaaagaagacaaaatctgacccgaatgcaccaccggtgggcagaatg
ccgttgcctaatctgaaagatgcggataaactggaaaaaattaaggcactgagggaagca
tcaaagagagttgttcttggacctgacacattaccatctatatgtttttatacaatgttg
aacactacttatactataacggcggcggaaatagcagaagactcaagtttattagctacc
ggatttagtgattccggcataaaagtatggagtctacttccacaaaaactgagggtgatg
aaaacgggcgaacaattacaggatattactagagaagcagaggacgtattggttagaatg
atggatgaccgaacatctgaaactgcaagacatctctatggtcatagtgggccaatttac
agtctttcatttagtccagatagaaatttactgctttcatcatcggaggatactacaata
aggctatggtcactgcacacatggacatgcgtcgtctgttacaaaggtcatctatttccc
gtatggtgtgtaagattctcaccgcatggttattactttgcaagcgcatcgaatgacaaa
actgccagattatgggcgactgattctcaccagccattacgaatatttgctggccattac
tcagatgttgatgtaattcaatttcatccaaattcgaattatgttgcaagcggttcaagc
gacatgactgtgagattatgggattgtgtaactggcaatcaagtccgattgatgactggg
cataaagaaccgattttttctttagctttctcaatagagggtcgatttttagcttcagcc
ggtgcggatcatcgtgtcctcatgtgggatttagcacacggccaccttgtcgcagcctta
tccggccacacggctaatattcactgtctatcgtttagtcgagatggcaatattctagtc
tcaggttccttagattacacactaaaattatgggacttcaccaaattagcggaggagatg
agcttggaagatgtcaatgtttcgcacaatccagatgtaaaaagtaactcggaatcttat
ctactgcgtacctttccgacgaaaaattcgtctgtcctggcgctacatttttcacgtaga
aatttactgctaggcgtcggcatgttcgactcgggataa

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