Temnothorax nylanderi: 139768149
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Entry
139768149 CDS
T11678
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
tny Temnothorax nylanderi
Pathway
tny03030
DNA replication
tny03410
Base excision repair
tny03420
Nucleotide excision repair
tny03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139768149
03410 Base excision repair
139768149
03420 Nucleotide excision repair
139768149
03430 Mismatch repair
139768149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tny03032
]
139768149
03036 Chromosome and associated proteins [BR:
tny03036
]
139768149
03400 DNA repair and recombination proteins [BR:
tny03400
]
139768149
DNA replication proteins [BR:
tny03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139768149
DNA Replication Termination Factors
ELG1-RFC complex
139768149
Chromosome and associated proteins [BR:
tny03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139768149
DNA repair and recombination proteins [BR:
tny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139768149
Check point factors
HRAD17(Rad24)-RFC complex
139768149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_16
AAA_lid_RFC1
RuvB_N
AAA_5
AAA_11
DUF815
DEAD
ResIII
AAA_30
AAA_19
AAA_24
nSTAND_NTPase5
AAA_7
AAA_assoc_2
TniB
Mg_chelatase
PhoH
RCF1-5-like_lid
ATPase_2
FtsK_SpoIIIE
MCM
nSTAND3
bpMoxR
TIP49
AAA_3
AAA_25
Motif
Other DBs
NCBI-GeneID:
139768149
NCBI-ProteinID:
XP_071554159
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MTSSNEQQNLPWVEKYRPKSLDELISHETIIKTINKYIDESQLPHLLLYGPPGTGKTSTI
LACARKLYTPAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYRSAFKLIILDEADAM
TNDAQNALRRIIEKYTDNVRFCIICNYLNKIIPALQSRCTRFRFLPLAAEQIMPRLNHVI
EAENLKVTEDGKEALMTLSGGDMRKVISVLQSTWFAYGAVNKENVYNCVGHPLPADINNI
VNWLLNESYDTCYTKIQKLKLDKGLALQDILTEIHSCIVKIDFPDPLFIDVLCKMADIEK
RLASGCRDAIQVNSLISAFYKLRNIET
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagcaacgaacaacagaatttaccatgggtcgagaagtatcgccccaagagt
ctggacgagcttatttcccacgagactataataaagacaataaacaagtacattgatgag
agtcagctgccgcatctcctcctgtacgggccacctgggacgggaaagaccagcactata
ctggcgtgtgctcgtaaactctatactccagctcaattcaattcaatggtgctggaattg
aatgcttccgatgacagaggcataggtatagtgcgcggccagatcctgagtttcgccagt
acgggtactatgtacagatctgcgttcaaattaattatcctggacgaagccgacgcgatg
acgaatgacgctcagaatgcacttaggagaattatcgagaaatacacggataatgtacgt
ttctgcattatatgcaactatctcaacaagattatcccagctttgcagtctcgctgcacc
aggtttaggttcctgcctcttgcggcggagcagataatgccaagattgaatcacgttatt
gaagcggaaaacttaaaagttacggaggacgggaaggaagcattaatgacgttaagtggc
ggtgatatgaggaaagtgataagcgtacttcaaagtacatggtttgcttacggtgcggtg
aacaaagagaacgtatataattgtgttgggcatccgttaccagctgacataaataatatt
gtaaactggttgctaaatgaatcttacgacacatgctacacgaagattcaaaagttgaag
ttggacaaaggacttgcgctgcaagatatattgacagagattcactcgtgtatagttaaa
attgattttcccgatccgttatttatcgatgtactgtgcaaaatggcagacatagaaaaa
agactggcttctggatgtcgcgacgccattcaagtaaattctcttatatctgcattctac
aagcttcgcaatatcgaaacgtga
DBGET
integrated database retrieval system
