Temnothorax nylanderi: 139773974
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Entry
139773974 CDS
T11678
Symbol
Sra-1
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tny Temnothorax nylanderi
Pathway
tny04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139773974 (Sra-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tny03019
]
139773974 (Sra-1)
Messenger RNA biogenesis [BR:
tny03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139773974 (Sra-1)
Factors involved in mRNA localization
Other mRNA localization factors
139773974 (Sra-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
139773974
NCBI-ProteinID:
XP_071564940
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MSISGSGTVPVHDLADVHFAVRETDEMTTDKVTLGDALSNVDVLDEFTLPDEQPCIEAQP
CSVVYQANFDTNFEDRNGFVTGIAKYIEEATVHASLNELLEEGLEHAVMLYTWRCCSRAI
PQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQRKAIERFSAEVKRLCHHEKRKDFV
SEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFLKVMSDSQTLQESQNLSMF
LATQNKIRDTVKENLEKITGYEELLADVVNICVHMFETKMYLTPNEKHMLVKVMGFGLFL
MDSELCNINKLDQKKKLKLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHFDASKWPLS
ASSNSMSPQADLMVHLPQIREDHVKYISELARYSNEVTTTYKECRSDTENRDTAELALRG
LQLLSQWTSVVTELYSWKLLHPTDHHMNKECPQEAEEYERATRYNYTDEEKFALIEVIAM
IKGLQVLMARMETVFIDAIRRNIYAELQDFVQLALREPLRKTIKNKKDLIRSIIVSVRET
CADWHFGVEPLGDPALKGKKDPDNGFGIKVPRRNVGPSSTQLYMVRTMLESLIADKSGGK
RTLRKDIDGQYLVQIDQFHKTSFYWSYLLNFSESLQNCCDLSQLWYREFYLEMTMGRKIQ
KCQVRHQHNEECSDLITMEKRIQFPIEMSMPWILTDHILRSKEPSMMEYVLYPLDLYNDS
ALYALTIFRKQFLYDEVEAEVNLCFDQFVYKLSEQIFAHYKQLAASILLDKRFRVECVAL
GAYLLPYPRANRYETLLKQRHVQLLGRSIDLNKLITQRINADMQKSLDLAISKFESGDIT
GVVELDGLLQVNRLTHKLLSKWLALDEYDAMFREANHNVLAPYGRITLHVFWELNYDFLP
NYCYNAATNRFVKCRGLQFVQPVHRDKPPQMSHHYLWGSKQLNLAYSTQYGQYTGFVGPH
HFRTICKLLGYQGIAVVMEELLKIVKTLIQGSLHQFTKTLMEAMPKVCKLPRYDYGSPGV
LGYYHAQLNDIVQYPDAKTELFHNFREFGNTILFCLLMEQALSQEEVCDLLHAAPFQNIL
PRPYCKEGEKPETKQKRLEAKYAALQIVPNVDKLGTAKQAMIAREGDLLTRERLCCGLSI
FEVVLSRLRSFLDDPIWVGPPPVNGVMNVDECTEFHRLWSALQFVYCIPVGETEFTVEEL
FGEGLHWAGCAMVVLLGQQRRFEALDFCYHILRVQRVDGKDENVKGIHLKRMVDRIRRFQ
VLNSQIFAVLNKYLKSGDSDAASVEHVRCFQPPLHPSLAHVQQHYHAPEYLRQINHQ
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtctattagtgggtccgggactgtccccgtccacgatctcgccgacgttcatttcgcc
gtgcgagagaccgacgagatgaccaccgacaaggttactctgggcgacgctctgtcgaac
gtcgacgtgctggacgagttcacgctgccggatgagcagccctgcatagaggcccaaccg
tgctccgtggtgtatcaggcgaactttgacaccaatttcgaggacagaaacggctttgtg
acgggtatcgctaagtatatagaagaagcgaccgtacacgcgagtctgaacgagctgctg
gaggaaggattggagcatgcggtgatgctgtatacctggagatgctgctcgcgcgcgatt
ccacagccgaaatctaacgagcagccaaaccgagtggagatttacgagaagacggtggag
gtgctagcacctgaagtgaacaaattgttgaatttcatgtattttcaaagaaaagcgatt
gaacgcttttcagcagaagttaagcgattgtgccatcatgagaaaagaaaagattttgta
tccgaggcatacttgttgaccctgggaaaattcattaacatgtttgcggtattggacgaa
ttgaaaaacatgaaatccagcgtaaagaatgactattccacatatagaagagctgcgcag
ttcctgaaggtgatgtcggactctcagacactgcaagaatcccagaatttgtcaatgttc
ttggcgacgcaaaataaaatccgcgatacggttaaagaaaatctcgagaagatcacggga
tatgaggaattactagcggacgtggtcaatatctgtgtccacatgtttgaaaccaagatg
tatctcacgcctaatgagaagcacatgttggtgaaagtgatgggctttggtttattcctg
atggacagcgaattgtgtaacatcaataagctcgaccaaaagaaaaaattgaagttggat
agaatcgacagaatctttaagaacctggaggtagtgccattgttcggagacatgcaaatt
gcaccgttcaattatatcaaacgctcgaagcactttgacgcgtcaaagtggccactatct
gcgtcgtcaaatagcatgagtccgcaagccgatcttatggtgcaccttcctcagatcaga
gaagatcacgtgaagtatatcagtgaattggcaagatatagtaacgaggtgactacgacg
tacaaggaatgccgaagcgacacggaaaatcgagacaccgcggaactggcattacgcggg
ttacaattactctcgcaatggaccagtgttgtgacagagctgtacagttggaagctattg
catcccactgaccatcacatgaacaaagaatgtccgcaagaggctgaagaatacgaaaga
gctacgcgctataactatactgacgaggagaagtttgctcttatagaagttatagcgatg
attaaaggattgcaggtattgatggcacgtatggagacagtttttattgacgcgatacgt
aggaatatatatgctgagctgcaagactttgtgcaacttgcattgcgtgaaccattaagg
aaaacaatcaaaaataaaaaggatttgattcgaagtataattgtttccgttagagaaact
tgtgcggattggcatttcggagtggaaccactcggagatcccgccttgaaaggcaaaaaa
gatccagataatggattcggcattaaagtcccgcgaagaaacgttggtccgtcttccacg
caattatatatggtgcgaaccatgttagaatcattaatagccgacaaaagcggtgggaaa
cgtactctaaggaaagacatcgacggccaatatctcgttcaaattgatcagtttcataaa
actagtttttactggagttatcttctgaatttcagtgaatctctacagaattgttgcgac
ttgtcgcagctatggtacagagaattttatctggaaatgacaatgggtaggaaaatacag
aaatgccaagtacgtcaccagcataacgaggagtgcagcgacttaatcaccatggagaaa
cgcattcagtttcccattgaaatgtctatgccatggatattgaccgatcacatattgaga
agcaaggaaccatcgatgatggagtacgttttgtatcctctggatttatataatgatagc
gccttgtacgcactgacgatattccgtaaacaatttctatacgacgaagtggaagccgaa
gtaaatctatgcttcgatcaattcgtttacaaacttagcgaacagattttcgcgcattat
aagcagctggcggctagtatcttgttggacaaacgattcagagtagaatgtgtggctctc
ggggcgtatttacttccatatccccgtgctaacagatacgaaacgttgctgaaacagagg
cacgttcagctattgggaagaagtattgacttgaacaaacttataacgcaacgtattaac
gcggatatgcaaaaatcattggatttggccattagcaaattcgaatccggcgatataact
ggagtcgtggagctagacggtttgttgcaagtcaatcgccttactcacaagcttttaagc
aagtggctcgcgttagacgagtacgatgccatgttcagagaggcgaatcacaatgttcta
gccccatacggaagaatcacccttcatgtattctgggaattgaattacgactttttaccg
aattattgttacaacgccgccacaaacagatttgtcaagtgtcgcggcctacaattcgta
caacccgttcatagagataaaccgccgcagatgtcgcatcattatctctggggtagtaag
cagttgaatctggcttatagcactcaatatggacagtatacgggattcgtcggtccgcac
cattttcgtactatatgtaagcttcttgggtatcaggggatagctgtggttatggaagaa
cttttgaagattgttaagaccttgatccaaggaagcctgcatcaatttacgaagactttg
atggaagctatgcctaaagtctgcaagcttccacgatacgattacggatcccctggagtt
ttgggctattatcatgcccagttgaacgacattgtgcaatatccggacgctaagactgaa
ttgtttcataatttccgcgaattcggcaatacgattctattttgtcttttaatggaacaa
gctctgtcacaggaggaagtgtgcgatttgctacatgcagcgccgtttcagaatattttg
cccagaccctactgcaaagagggagaaaaacctgagaccaaacagaaacgattagaggca
aagtatgcggctttacaaattgttcccaacgtagataaattaggtaccgctaagcaagcc
atgattgccagggaaggagatttgttgacgcgcgaacgactgtgctgcggcttatcgata
ttcgaagttgtgcttagcagattacgaagtttcttagacgaccccatctgggtcgggcca
ccgccggtaaatggtgtaatgaatgtggacgaatgcacggaattccatagactttggagc
gcgcttcaatttgtatactgtattcccgttggtgaaactgaatttactgttgaagaattg
ttcggcgaaggtttgcactgggcgggatgcgccatggtcgtccttttgggccaacaacgt
aggtttgaggcacttgatttctgctaccacattcttcgagtgcaacgtgtggatggcaaa
gacgagaacgttaaaggaatacatttgaagaggatggtggatcggataaggcgatttcaa
gtattaaactcgcagatatttgccgtgttgaataaatatttgaaaagcggagacagcgat
gcggcaagcgtggaacacgtgcgctgttttcagcctccgttacacccttcactggcgcac
gtgcaacaacattatcacgcacctgaatatttacgccagataaatcatcaataa
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