Temnothorax nylanderi: 139775518
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Entry
139775518 CDS
T11678
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
tny Temnothorax nylanderi
Pathway
tny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139775518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tny03019
]
139775518
Messenger RNA biogenesis [BR:
tny03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139775518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_14
TPR_CcmH_CycH
TPR_1
TPR_8
TPR_17
CFAP70_TPR_C
TPR_11
TPR_12
CFAP70_mid_TPR
CABIN1_N
ANAPC3
ARM_TT21_C
TPR_7
TPR_9
PknG_TPR
TPR_21
BTAD
DUF7017
TPR_SusR
Alkyl_sulf_dimr
TTC22_N
TPR_10
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
139775518
NCBI-ProteinID:
XP_071567660
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLEVMKKCKKVLKKDKSNYAALVLLARSMQEVEEFKSQVS
LVLQKAVEVQPNNPLAWQGLAAHYEKAPQDHDNWKKLALAYCKLLQLDSDSPKFAHFVNK
ISEIILRIKNDDVLSEALNTLSTLREVSTKEKINLIDKTLVWVLSEYPNDRINEHQELYE
NVLASVIKDVELMNRQEYYRKYLKMLYDSNKFTALLAAARDMHIQFPQDACPLEWLCRIY
YENAALSENELEIDITQFYEPLSKLSTNSDVALIAKAAYLKRKDELIDSRDCLKKVVSLN
AQSFYAWLMLSQIHYDLYCWKETENASRKALQLIKPCLKDKFQQGIKLRLLEAISRSSDK
EKLVEARQMCEELLSIEPSVQLRVIHARTNILLDEPDVTAIINNLESQDETKLQAFVLKA
LHLKEHKQYQEAVNILELALENSEAWLLFGKIYWDMEDYNRSLVAFLNGVQADRNNWECM
LYLGRYYREHSNDIERSRKCYHTALQINPNSEEAGIGLSTAYRLLKDTASNIRLLHRVTK
QGTGPRWAWLQLGLHYLDEGDAGQAITALQHVIRADPNDNHSWESLADAYLVRGAHTSAL
KSYQRALQLSPGSLYPMIQLANIKLLIGQHKEAKEAFESILQNDERHILALKGLAQACIG
LAKENIAKQFLCRARENLQQAADSLVDVIMIRNDLLCNYKLLGDVCYRIITLPEKYCYLR
IKPKAFSLAMMNCDSTEKYVNIKGDEIIMLSIGYFNRIISMQNSASLWHDLTCCYLMQLN
RATTVNKSDVATKCYEAAKRAVKLCPQSWLHWNILGVICMTVYVKNYALAQHCYVMAIER
ESNNATAWSNLGTLYLYLGDIYKANEAFSRAQRADPSYVNSWVGQGLIAEKILRKEAMDL
FRHSTQLGYHNQAALGYAHWVLTTLLSPAMKKDPLLIYFIENMHAIPAASDVLTWYLERE
PYDVYALNTHGLLLERLKLYNTAAKQFAIALKLSEDEERDMISINLARILIQTGKYEEAV
ALCKQVKCANFNSQCHLALSLFKAKQYEESYNTYEAALHWLADTSADKANILCAMAAIAY
MFQGADAVKTLLFQCIQIKPPIVTGFLATAALGILHDDVNLTSLVLNELKSYENHHEYGY
HVVILSAYRQVIQGNLTQATRILTKAIFRHPNDVRYWVRLVRVLLLDEDLNIFRKCALTA
LTLSRNTSMTDIVYVACASAYSHFGTKEGLRQAQKNIFTYPSNVESWANFVAALLCRNKD
CAPINNQWILSLISVMKSQFQTSENMSRWLFHNERELDNL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacataaagatcttgttgaaggaggcccgcgagtccttcaagcaaaatgaa
tatctggaagttatgaagaaatgcaagaaggttttgaagaaggacaagagcaattatgcg
gcgttggttctgttagcacgttccatgcaagaggtggaggaatttaaatcgcaggtatcc
ttggtccttcaaaaggccgtggaggtgcaaccgaataatccgttggcctggcaaggatta
gcggcacattatgagaaagctccacaggatcacgacaactggaaaaagttggctctagcc
tattgcaaactgttgcagttagatagcgactctcctaagttcgcgcatttcgtgaataaa
atctccgaaattatcttgcgcatcaagaatgatgatgtcttgtccgaagcgttgaacaca
ttgagcacgttacgagaggtttctaccaaagagaagatcaatctgatcgataagaccctg
gtatgggttttatcggagtaccctaatgatagaataaacgagcatcaggagctttatgaa
aatgtgttggcgtctgtaataaaagacgtagagctaatgaatagacaagagtattacagg
aaatatttaaaaatgctgtatgattcaaataaatttacagcgttgttagcagccgctcga
gacatgcatattcaatttccacaggatgcttgtcctctagaatggttgtgccgtatctat
tacgaaaacgctgcactgtctgaaaatgagcttgagatcgacataactcagttttatgag
ccgctttccaagctgagcacaaattccgatgttgcgcttatcgcgaaagcagcatatttg
aaaagaaaagatgagttgatcgattcacgcgattgcttgaaaaaagtagtatcgttaaat
gcgcaatcgttttatgcttggttgatgttgagccaaatacattatgacctttactgctgg
aaagaaactgagaatgcttccagaaaagcgctacaattgataaaaccctgtttaaaggat
aaatttcaacagggaatcaagttgaggttgcttgaagcgataagcagaagtagcgacaaa
gaaaaattggtggaagcgcgtcagatgtgcgaagagctgttaagcattgagccttccgta
caattgcgagtgatacatgcacgcacaaatatattactggatgaaccagatgttactgct
ataataaataacttggaatctcaggatgaaactaagctccaagcttttgttctcaaagcg
ttgcatctaaaagagcacaaacagtatcaggaagctgttaacattctcgagctagcttta
gaaaattctgaagcttggttgctgtttggtaaaatatattgggatatggaagactacaac
cgcagtctggtggcattcttaaatggcgtacaagcggatcgaaataattgggaatgcatg
ctttacttaggacgttattaccgtgaacatagtaacgacatagaacgttcaaggaaatgt
tatcacaccgcgttgcaaatcaatccgaattccgaggaagctggtattggattgagcaca
gcttatcgtcttctcaaggataccgcttccaatatccgactgttacacagagtaactaag
caaggtactggaccgagatgggcttggctccaactgggtttgcattacttggatgaaggt
gacgcggggcaagctattacggcattgcagcatgtgatcagagccgatcctaatgacaat
cacagctgggaatctctggcggatgcgtacttagtacgcggtgctcacacatcggcactg
aaatcgtatcaacgcgcgctacagttgagcccaggatccttgtatcccatgatacaacta
gcaaatatcaaactactcattggtcaacataaagaagccaaagaagccttcgagagtata
ttgcagaacgatgaacggcacattcttgcattgaagggtctagcacaagcgtgtataggt
ttggcaaaggaaaatatcgcgaaacaatttctatgtcgcgcgagggaaaatctacagcaa
gcagcagacagtttggtagatgttattatgatacgtaatgatctactttgcaattacaaa
ttgctgggcgatgtgtgctatagaataatcactctgccagaaaagtattgctatttaagg
attaagccaaaggctttctctttggcgatgatgaattgcgacagtaccgaaaaatatgtg
aatattaaaggagacgagataatcatgttgtcaatagggtattttaatcggataatatcc
atgcaaaattctgcatcgttatggcatgatttaacctgctgttatttgatgcaactaaat
cgcgctactacagtcaataagagcgatgtggcgactaagtgctacgaggctgcaaaacgt
gccgttaaactctgcccgcaatcgtggctacattggaatattctgggtgttatttgtatg
acagtgtatgtaaaaaattatgctctggctcagcattgttacgttatggcgatcgagaga
gaatcgaacaatgcaacagcttggagcaatttgggaacattatacttgtatctaggagat
atctataaagcgaatgaagcattttctcgagcgcaacgtgctgatcctagttacgtgaat
agctgggtcggacaaggattaatcgcggaaaagatcctgaggaaagaagcgatggatctg
tttcggcattcgacgcaactgggttatcacaatcaagcggctttaggctatgctcattgg
gtgcttactactctcctgagtcccgcaatgaagaaagatccgctgttgatctattttatc
gagaacatgcacgcgatacctgcagcatctgacgttctcacttggtatttagaacgcgag
ccgtatgatgtttacgccttgaatacccatggcttattattggaacggctgaaattatac
aacacggcggctaagcaatttgccatagctttaaaactaagcgaggatgaagaaagagat
atgatatccataaacttggcacgcatcctgattcaaaccggaaagtacgaagaagcggtg
gcattgtgcaaacaagtgaaatgcgcaaattttaattctcagtgccatcttgcattatcc
ttattcaaagccaagcagtacgaagaatcgtacaatacatatgaagcagctttacattgg
ctagcagacactagtgcggataaagcgaatatcttgtgcgcgatggccgcgatcgcttac
atgttccaaggggcagatgctgtcaagaccctgctattccaatgtatacaaataaaaccg
cctattgtgactggtttcttagcgactgccgcgttaggaattttacatgacgacgttaat
ttgacttctttggtactgaacgaattgaagtcatatgaaaatcatcacgagtatggttat
cacgtcgtcatactgtcagcataccgtcaagttattcagggaaatctcactcaagctaca
cgaatactcaccaaagctattttcaggcatcctaacgatgttagatattgggtacgcctt
gttcgagttttactgttggacgaagatctgaatattttccgtaaatgtgctctaacggcg
ttgacgctaagcagaaatacgtctatgaccgatatcgtatatgtagcttgcgcatcagcg
tacagtcacttcggcacgaaagagggtcttcgacaagctcagaaaaatatatttacatat
cccagcaatgttgagagctgggctaattttgttgcagctcttttatgcagaaataaggat
tgcgctccaattaataatcagtggatattgtcgctaatatcagtaatgaaatcgcaattt
caaacttcagaaaatatgtcacgatggttatttcataatgagagagaacttgataatctc
taa
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