Temnothorax nylanderi: 139776205
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Entry
139776205 CDS
T11678
Name
(RefSeq) uncharacterized protein
KO
K19719
collagen type II alpha
Organism
tny Temnothorax nylanderi
Pathway
tny04512
ECM-receptor interaction
tny04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139776205
04518 Integrin signaling
139776205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tny00536
]
139776205
Glycosaminoglycan binding proteins [BR:
tny00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139776205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
139776205
NCBI-ProteinID:
XP_071568841
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MRRQALELITGLLVVQLLLPLPDQVNAVKNRLRKQRSKPQEHQAHHSQQPGNNYDEYEYN
YENYDEYEDKNETTTMLPSLIIPSDATRLSGWSETPTETLLRQSEPTHLPAPTQFYDHDL
EETSPTSERNYSVSPTEILPGESNIYSSVALPGPRGQPGRPGDTGRPGDTGFPGQPGTPG
TPGPPGPPGPVPDVSLYYQQLALSQANEDKGPTGAAASLYGPEALSYIQAQVGPMGPRGP
PGSPGAPGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPLGSPGP
VGPRGPSGIPGLPGLKGHRGFPGLDGAKGEQGAPGEKGSMGSPGPMGPVGPMGPAGPRGE
RGREGSPGPPGLRGLDGIAGPPGQPGAIGKPGSPGFPGNPGIKGDQGPQGPTGSQGLQGP
RGESGRPGQPGETGPQGPQGKDGISGEKGVTGATGPIGLPGFPGARGQPGTPGNPGIPGA
KGAPGLPGERGFKGDAGVKGDAGMPGPRGLPGPTGNEGKRGKRGIRGPIGAAGPTGERGA
PGARGLPGSDGPVGPQGQPGDRGPAGAVGPKGTAGDPGRPGPPGLQGARGLMGRPGAPGK
PGNPGERGIQGADGKPGEQGPPGLQGLPGPLGPTGERGYPGERGKDGEPGNPGSPGPRGD
TGKEGAPGAQGPPGPSGSDGARGPPGLTGPRGFQGLPGAAGNPGVPGKDGEAGVQGRPGP
PGLTGNRGERGLPGERGLMGPPGLMGPRGETGAQGADGLIGLPGLKGDKGSFGSPGLLGL
PGARGLSGEPGQKGERGTPGPIGPEGPSGHIGERGPQGEVGPPGPPGEPAERGDPGPPGP
IGETGAPGNPGERGPHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNLGLPGNRGE
IGLPGPIGLTGAKGIRGEPGARGEPGLMGPPGITGHVGPSGPPGNVGPPGAPGFPGIKGD
SGDIGRPGNPGPIGNPGPPGIDGIKGESGSPGSQGPMGPQGPQGLPGERGLPGLPGSAGP
IGNRGLRGAPGETGQPGKPGAEGPSGPPGLIGPPGSPGHVGEAGPEGPIGKPGPPGIGGR
PGDKGPPGVSGAAGPSGPPGLPGPPGSIGPTGLTGERGSKGETGPQGVEGPQGPRGKPGL
TGLEGAKGDRGEEGQKGAKGHRGFTGLQGLPGSPGLVGEKGASGLPGPPGKDGEPGIRGN
PGREGNPGPIGPAGNPGPRGPAGEEGRHGSPGLPGPPGPPGPPGEIGFGYDAASLAALIG
QGQTKGPDPLGDEPPRIFGKDITEKERRELLLKAYENLKSSFQKLVKPDGEKNSPAKTCR
DLFAAYPDKLSGEYWIDPNEGDIRDAILVYCDAEKRATCILPNPSRSPEMTHITDQQETW
LSEIDGSMKITYKADSNQISFLQLLSKHANQNITYHCKNSVAYFDYEKKTYRKGLKFLAW
NDVELTPRGNQRLRYEMIMDECRFHQDRWGKTIVSYETDKPVRLPILDVALRDIGKPEQS
FSIEIGAACYD
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgagacggcaggctctagagctgatcacgggtctgctcgtggtccagctgctgctgccc
ttgccggatcaagtgaacgccgtgaagaaccgattgaggaaacaacgatctaagccgcaa
gagcaccaggctcatcactctcagcagcctggcaacaattatgatgaatatgaatataat
tacgagaactacgacgaatacgaggacaagaacgagactacaacaatgttaccatcacta
ataataccatcagatgccacgcgactttcaggatggtccgaaacaccgaccgaaacactc
ttgagacaatcagaacctacacacttaccggctcctacgcaattttatgatcatgattta
gaggagaccagtcctacatctgaacggaattactcagtttcacctacggaaattttaccg
ggtgagagtaacatatatagttctgtagcgctaccaggaccacgaggtcaacctggtcga
cctggagatactggtcgtcccggtgatacgggatttcctggacaacccggtacgcctggg
accccagggccacctggacctccaggacctgtacctgatgtatctctatattatcaacaa
ttggctttgtctcaagcaaatgaagataaaggcccgacaggtgcagcggcgtcattgtat
ggaccagaagcattatcttacattcaagcgcaagtaggcccgatgggtccgcgaggccct
ccaggttcgcctggtgctcctggtcctcaaggttttcaaggtacacgaggtgaaactggt
gaattgggttccccaggtcctcctggcatgccaggtcctagaggcttgccaggattaccc
ggaaaggatggtatcagtggagaagatggcgaaaccggtccactgggatcgcctggtcct
gtgggaccacgtggtccttcaggaatacctgggcttccagggttaaaaggccatcgtggt
ttcccaggtctagacggtgctaaaggtgagcaaggagctcctggtgaaaaaggatccatg
ggctcgcctgggccgatggggccagtaggaccgatgggtccagcagggcctcgtggtgaa
agaggtagggaaggttcaccgggtcctcctggattgagaggccttgacggaattgctggg
ccgcctggacaacccggtgctataggaaaacctggctcaccaggttttccaggaaatcct
ggaataaaaggtgatcaaggaccacaagggccaacaggaagccagggtttgcaaggtccg
cgaggtgaaagtggccgcccaggacaacctggtgagactggtccacaaggtcctcaaggc
aaagatggaatttccggtgagaagggagtcactggagcgacaggacccattggtttgccc
ggatttccaggtgctcgaggtcaacccggaacaccgggtaatcctggtatccctggcgct
aaaggagcacccggccttcctggtgaaagaggttttaaaggagacgctggagtgaaaggt
gatgcaggaatgcctggtccgcgtggacttccgggacctaccgggaacgaaggcaaaagg
ggcaagagaggaatacgtggaccaatcggcgctgcggggcctactggagaacgtggcgca
cctggagcgcgtggtcttcctggctcggatggtcctgtcgggcctcaagggcaacctggt
gatcgtggtcctgccggagctgttggaccgaaaggcaccgctggagatcctggacgacct
gggccaccaggattacagggtgcgcgtggtttaatgggtaggcccggagctcccggaaaa
ccaggtaatcctggagaacgtggaattcaaggtgcggatggcaagcctggagaacaaggg
ccgcctggactgcagggtctaccaggaccattaggaccaacaggagaaagaggatatcct
ggagaacgcggaaaagatggtgagccgggcaatccaggttcgcctggtccaaggggagat
accggtaaagaaggggctccaggggcacagggtccaccaggtccatcgggaagtgacggc
gcgcgaggtcctccgggactcaccggtcctagaggttttcaaggtctaccaggagccgcc
ggtaatccgggtgttccaggcaaggacggagaagcgggagtacaaggacgtcccggtccg
ccgggattaaccggcaatagaggcgagagaggacttccgggagaaagaggacttatggga
cccccaggacttatgggtcctagaggagaaacgggagcacagggtgctgatggtctcatt
ggtttaccaggacttaaaggagataaaggaagttttggttcgccgggactactaggactt
cctggtgcgagaggattatccggagaacctggacagaaaggagagaggggtacacctgga
ccaatcggccccgaaggtccatcaggacatattggagagcgtggtccacaaggagaagtt
ggacctcctggccctcccggggaaccagcagaacgaggcgatccaggtcctcctggtcct
attggtgagaccggagcacctggaaatccaggagaaagaggacctcatggattacagggc
tcgcaaggttttccaggtccacaaggattaatcggacttcctggtttgaaaggcgatcgc
ggatatcctggcttaaaaggagaacaaggaaatctgggactgcctggcaatcgcggcgaa
atcggattacctggacctattggactcactggtgctaagggaattagaggcgaacctggt
gcacgaggcgagcccggtttaatgggcccacctggtatcacgggacatgttggaccatca
ggaccaccaggaaatgtgggaccacctggtgctcctggatttccgggtattaaaggcgat
tcaggcgatattggacgtcctggaaatccaggtccaatcggtaaccctggtccacctgga
atagacggaattaaaggcgaaagtggatccccaggatctcaaggaccaatgggtcctcaa
ggacctcaaggtttacccggcgagagaggtttaccaggcttacctggttctgctggtcct
ataggaaatagaggattacgcggagctcctggtgaaacaggacaacccggaaaaccagga
gcggaaggtccatccggacctcccggattaataggtcctccaggttctcctggtcatgta
ggagaagcaggaccagagggaccaattggaaaaccaggaccaccgggtataggaggccga
ccaggtgacaagggacctcctggggtatctggtgctgcaggaccgtcaggtcctcctgga
ttaccaggaccacctggatccattggacctaccggactcactggagaacgtggctcgaaa
ggtgaaacaggaccgcaaggtgtggaaggaccacagggaccacgaggaaaacctggccta
acgggtctcgaaggtgcaaaaggggatcgcggagaagaggggcagaaaggagccaaggga
catcggggatttactggtttgcaaggattgcccgggtctcctggtttagtaggagaaaag
ggtgcatctggtctgccaggacctcccggtaaagacggagagccaggtattagaggtaat
cctggacgggagggtaatccaggacctatcggacctgcgggaaatcccggaccaagaggt
ccagctggggaagaaggtcgccatgggtcaccaggtcttccaggaccacccggaccacct
ggtccgcctggagaaataggtttcggctacgatgctgcatctctagcagcacttatagga
caaggccaaactaaaggaccagatccacttggtgatgaaccaccaagaatatttggtaaa
gatattactgaaaaggaacgaagagagttgcttttgaaagcgtacgaaaatctaaaatcg
tcgttccaaaaattggtgaagccggatggtgaaaaaaattcgcctgctaaaacctgtcga
gatctatttgctgcttacccggacaaattatctggcgagtactggattgatccaaacgaa
ggagatattcgagacgcgatcttggtgtattgcgatgccgagaaacgtgcaacttgcata
ttaccgaatccatcgcgttcaccagaaatgactcacattactgatcaacaggagacctgg
ctaagcgaaatagatggcagtatgaagattacatacaaagcggacagtaatcaaattagt
ttcttgcaattgctctccaaacacgcgaatcagaacattacgtatcactgcaaaaatagt
gtggcttacttcgattacgagaaaaagacgtacagaaagggcctgaagtttttggcttgg
aacgacgttgaattaacaccacgaggcaatcagcgtcttagatatgaaatgataatggat
gaatgcaggttccatcaagaccgctggggtaaaactatcgtctcatatgaaacggataaa
cccgtaagacttcccatcttagacgtggctttgcgagatatcgggaaacccgaacagagt
ttctccattgagatcggtgcagcgtgttacgattaa
DBGET
integrated database retrieval system
