Temnothorax nylanderi: 139777043
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Entry
139777043 CDS
T11678
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tny Temnothorax nylanderi
Pathway
tny03440
Homologous recombination
tny03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139777043 (Top3alpha)
03460 Fanconi anemia pathway
139777043 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tny03032
]
139777043 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
tny03400
]
139777043 (Top3alpha)
Enzymes [BR:
tny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139777043 (Top3alpha)
DNA replication proteins [BR:
tny03032
]
Eukaryotic type
DNA Topoisomerases
139777043 (Top3alpha)
DNA repair and recombination proteins [BR:
tny03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139777043 (Top3alpha)
FA (Fanconi anemia) pathway
139777043 (Top3alpha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-LITAF-like
Ribosomal_aS21
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
139777043
NCBI-ProteinID:
XP_071570305
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MLIYTSFNVAYIQKRIASSKEPNLRRQKIVNNTKRHVMALSKLYNIALDCTIYYGLRGIN
NLSSNKSANSFYPLRRYCSQRIMKVLNVAEKPNAAKTIAGYLSHGTSRKREGFSVYNKIF
EFNVQLWGQNCQMMMTSVTGHLLGYDFTGAYSKWHSCHPLSLFDAPVSKQCLDDNYVKIK
RTLEREIRSCDTLIIWTDCDREGENIGFEIIQVCQAVKRNIRVYRAKFSEITKQSVERAL
QTLGEPDKAMSDAVDVRSELDLRIGAAFTRFQTLRLQKVFPNTLGDMLISYGSCQFPTLG
FVVERFLAINRFKSEPYWKLRVLDEREEMSVEFRWARVRLFEKMPCQIFLDMCLEQPEAT
VEKVTCKPKSKWRPLPLDTVELEKQGSRKLRINAKETMRIAERLYTQGLISYPRTETNIF
PKELNLAPLVEQQVNHREWGDFARNLLDSGITPRQGKKSDEAHPPIHPTKYADNLQGNEA
KVYEFVVRHFLACLSKNAEGRETTVEINIAGERFTANGLEIIAKNYLDVYVYEKWNSKQI
HSYEQRQVFRPTSIDMVEEKTSAPNLLTEAELIALMDKHGIGTDATHAEHIDTIKSRQYV
GLTDTQHFMPGKLGIGLVMGYDNMGFQMSKPHLRAELEKDLQLICQRQKDPNQVLQNQVD
KYRQVFQVAIERANLIDDSLAHYLDERPIQAEQALLTQVSDVAVFKCPKCGSDMVLRERR
QGRGKYISCMGTCTNVIWFPETVEDVEVLNETCNQCTENIRKLKFKLVRTMVPLYGTSYT
TCIGCNTEFREMSNIKEDCIKQTGVRRTNYTGHNNTRDTGSCSTSTSSTSQSRSIQQQSV
SSSTGSTVRSNNNVGSIGISGTSESRAQNQHSNVSQLNRSNRPNTDRSTTSNNRESHNSW
INSGDFNSSWNRSNPYAARDSRNTNRITNTWGNIDNNTEIMCYCHELAIQLTVRKEGPNK
GRLFYKCAKPQGSGCNFFLWASDNAEPPEDNAANEHSSWVSNLNRNNDGAAGNFSRVGTC
NNDWGNSSTNDVICQCNQPARKLTVHKDGPNKGRQFYGCPKGMNSTCKFFKWADEDDAGS
HENTDWSNSTARGRGNTARSRMPQKGSAPKRPRPTGGKRKCGNCGIEGHTKNKCPSSGAG
RTDK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatacacgtcgttcaatgttgcgtatattcagaaaagaattgcttcgagtaag
gaacctaaccttcgtagacagaaaattgtcaacaataccaagcgtcatgttatggccctc
tctaaattatacaatatcgcattggattgtacgatatattacggtctgaggggcatcaac
aatttgtccagcaacaagtctgcgaattctttctacccgttaaggcgatattgttcacag
cgcattatgaaggtcctcaatgttgccgagaagccgaacgcggctaaaactatcgctggt
tatttgtcgcacggtaccagcagaaagagggaaggtttttccgtgtataacaagatcttc
gaatttaatgtccaactatggggtcaaaactgccaaatgatgatgacatccgtgaccggc
cacttattaggctacgattttactggagcctatagcaagtggcacagctgtcatccgtta
agcttattcgatgctccggtatctaagcagtgcttagatgacaattacgtaaagatcaag
aggaccttggagcgagaaataagatcctgtgacacattgattatttggacagattgcgac
agagagggggagaacataggctttgagattattcaggtctgccaagcagtcaagcgtaat
atccgtgtatatagagcaaaattctcggaaattacgaaacagtccgtcgaaagagccctg
caaactttgggagaaccagataaagcgatgagcgatgccgtagatgtaagaagcgaatta
gatttacgaattggtgctgcgttcacgagatttcagaccttaaggttgcaaaaagtattc
cccaatactcttggagatatgctcatcagttacggaagctgccagtttccaacacttggg
tttgtagtcgagaggtttctagccatcaatcggttcaaatccgagccatactggaagcta
agagtgctcgacgaacgcgaagagatgtctgtagaattcagatgggccagggtaagattg
ttcgagaaaatgccgtgccagatctttctggacatgtgcttggaacagccggaagctacg
gtagagaaggtaacgtgcaaaccgaagagcaaatggagaccgctacccctggataccgtt
gaattggagaaacaaggctctcgtaagttgcgcataaacgcgaaggagacgatgagaatc
gcggagagattgtacacccaaggtctcatcagttacccacggacggaaacaaatatattc
ccgaaggaattgaatctggcacctttagtagagcaacaagtaaaccatcgggaatggggt
gactttgcgcgaaatttactcgactctggaataactcccaggcaaggaaagaaaagcgat
gaagcgcatcctcctattcatcctacaaaatatgccgacaatttgcaaggaaacgaagcg
aaggtctacgaatttgtggttcgacattttctggcttgtctgtcgaagaacgccgagggc
cgggaaactacggtggaaatcaatatagcgggagaaagattcacggctaatggtctcgaa
atcatagcgaagaattatcttgacgtgtatgtatacgaaaaatggaacagcaagcaaatt
cactcttatgagcagagacaagttttccgaccgaccagcatcgatatggtggaagagaag
acttcggcaccgaatttgttaaccgaggccgagttgatcgcactgatggacaagcacggt
atcgggacggacgctactcacgctgaacatatcgacaccatcaaatccaggcaatatgtc
ggtttaacggacactcaacatttcatgccaggcaaattggggattggtctggtcatgggt
tacgacaatatgggtttccaaatgtccaagccacatttgcgcgcggagttggaaaaagat
ttacagctgatatgccagcgtcaaaaagacccgaatcaagtgttacaaaatcaagttgat
aaatatcgccaagtattccaagtggcgatagaacgcgctaatctgatagacgactcttta
gcgcactatctcgacgagagacctatccaagctgagcaagcactgcttacgcaagtgagt
gacgtcgctgtattcaagtgtccaaaatgcggctctgacatggttctaagagagagacga
caaggcagaggaaaatatatcagttgcatgggaacgtgcaccaacgtcatctggttccca
gaaactgtagaagatgtggaagttttgaacgaaacatgcaatcagtgtacagaaaatata
cgcaaattaaaattcaaattagtcaggactatggtacccttgtacggtacctcttacaca
acttgtataggctgtaataccgaattcagagaaatgtcgaacatcaaggaagattgcatt
aaacaaactggagtgagaagaacgaattataccggtcacaataatacgagggatacaggg
agctgctccacttctacctcaagtacatcccaatcgcgaagtattcaacaacagtccgtt
tctagtagtacaggaagtactgttcgaagtaacaacaatgttggctcgatcggaatttct
ggcacatctgaaagccgtgcacaaaaccaacattctaatgtttctcagctgaatagatca
aataggccgaataccgatagaagtacaacgtcgaacaatagagaaagccataattcctgg
attaattcgggtgatttcaatagttcatggaacagatcaaatccatatgcggccagagat
tctcgcaacacgaatcgtataaccaatacgtggggtaacattgacaataatactgagatt
atgtgttattgtcacgagcttgcgatccagttaacagttagaaaagagggaccaaataaa
ggacgtttattttacaaatgcgctaaaccgcaaggtagcggttgcaattttttcttgtgg
gcatctgacaacgccgaaccacctgaagataacgcagcgaacgagcattcaagttgggta
tctaatctgaatagaaacaatgacggtgctgctggcaacttctctcgcgttgggacttgt
aataacgattggggaaactcatccacgaacgatgttatatgccagtgtaatcagcccgct
cgaaagctgacggttcataaggacggccccaataaaggacggcagttttacggatgtccc
aaaggtatgaactccacctgtaagttcttcaagtgggcagacgaggatgacgccggtagt
cacgagaacacggactggagcaattccactgcgagaggaagaggcaatacagcacgaagc
agaatgcctcaaaaaggcagtgcccccaaaaggcctagacctaccgggggcaagagaaag
tgcggaaattgcgggatagaaggtcacacgaagaacaaatgtccatcaagtggggcgggg
cgaactgacaagtga
DBGET
integrated database retrieval system
