Temnothorax nylanderi: 139777702
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Entry
139777702 CDS
T11678
Symbol
Dor
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tny Temnothorax nylanderi
Pathway
tny04140
Autophagy - animal
tny04142
Lysosome biogenesis
tny04145
Phagocytosis
tny04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
139777702 (Dor)
04142 Lysosome biogenesis
139777702 (Dor)
04140 Autophagy - animal
139777702 (Dor)
04148 Efferocytosis
139777702 (Dor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tny04131
]
139777702 (Dor)
Membrane trafficking [BR:
tny04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139777702 (Dor)
Hops complex
139777702 (Dor)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf_RING_Vps8
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
zf-rbx1
zf-RING_16
Laminin_I
Motif
Other DBs
NCBI-GeneID:
139777702
NCBI-ProteinID:
XP_071571370
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVPAPPIRPDISTAGFIQMKLQDDGPIFTKQKVNFLPSDKILHL
AVSSNTIVIAMANNILLRIDMKQPDKTEEIDMSKYALSVKMSGLFLDPLGHHLLITLVPR
HGDNPPPELFYLHKKTTKLKQAGKFKGHEITAVGWNFSNASETSSGPILLGTSKGLIFET
EIGLETDKIFNTSLEQYWRQLPNYLPLYGSKEAGGLVFDIGKNSKPPITGIEFHKIPNSD
KYVIIVTTLMRIYQYIGVVGNPEEKPLLQQVFYRYLNAQETFNEVINSLPYSKMQFYYPS
LGVLPKSFGWLTEAGILYAQVDAKPDAKYVLVNQRMLTCPETSLMGSNVPQTTLVPLSFV
LTEFHALLLYPDHVKGISLLNQELIFEDVYNDAVGKLIGITKDPATRSIWAYSERAVFKY
KVTKEDRNVWQVYVDKGEFELAKQYCRDNPAHIDQVLVKQAEMLFKNKEYEKSALIYADT
HSSFEEVSLKFLQEWQIEALKTFLRKKLDGLKTQDKTQITMIVIWVTELFMNQMGALRSS
NTSYLHDSQYTELQKQFDSFLTIPKVEECIRRNRSTIYDLMASHGDKDNLICLTIMHCNY
EEVIRQHLYKNNYLEALGVLKSQNNKDLFYQFAGILLQELPRPTVAVLISQGSSLKPAKL
LPALVSCNSDEKHAKEIIKYLEFCVYKQGSQEQAIHNFLLSLYARYKQGEVMRYISSQGQ
DISMVHYDVHYALRLCQEVGLTEACVQLSALLGLWTTAVDLALTISVDLAKQIAAMPSDH
DNELRKKLWLKIAEHVVREKDDIQQAMEFLQHCDLVRIEDILPFFSDFVTIDHFKEAICN
SLQEYNQHIQDLKEEMQEATKAAELIRKDIQVFRTRCTFVHARDTCNTCEVQLLLRPFYV
FPCGHKFHSDCLVAALTPMLSMDQRTKLADLQRQLTAISNRPEDTTSTISVSLSTRDQIK
ADIDELVASECLYCGELMIESIDKPFIEEEDYERVMKEWT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatgtttgaccagtacgagcaagcttctcagcgttccaagcaagtgccggca
ccaccaattcgtcctgatatcagcacagctggatttattcaaatgaagctgcaagatgac
gggcccatattcactaagcagaaggttaactttctgccgtcagataaaattcttcactta
gctgttagcagtaacacaattgtgattgctatggctaacaacattttgctacgcatcgac
atgaaacaacctgacaaaactgaagaaatcgacatgtccaagtatgcgttgagcgtgaaa
atgtccggcttgtttttggaccctttgggtcatcacctgctgataactttggtgccgaga
cacggggacaacccaccgccggaattattctacttgcataagaagacgacgaagctcaag
caagctggcaagttcaagggtcacgagatcaccgcggtgggctggaacttttctaatgct
tcggaaacgagctcgggtcccattctactaggcacttccaaaggcctgattttcgaaacg
gagatcggcttggagactgacaagatttttaacacgagtttggagcagtactggcgtcag
cttccgaattatctgcctctttatggttcaaaagaggcgggaggattggtgtttgacatt
ggaaagaatagcaagcctccgatcactggaatagaatttcacaaaattcctaattcggat
aaatatgtgattatcgtgaccacccttatgcgcatttaccagtatattggtgtcgttggc
aatcccgaagagaagcctctcttgcaacaagtattctatagatatctaaacgcgcaagag
acctttaacgaagtaataaattctttgccatattcgaagatgcaattttactatccatcc
ctaggcgtcctgccaaagtcatttggatggctgacggaagctggtatcctgtatgctcag
gtggacgcgaaaccggacgcgaaatacgtactggtgaatcaacggatgttgacgtgcccg
gaaacaagtctcatgggtagtaacgttccgcaaaccactttggtgccgttgtcctttgtg
ctgacggaattccatgcgttgctgttgtatccggatcacgtgaagggcatatcgctccta
aatcaggaattgatattcgaagacgtttacaatgatgcagtcggcaaattaattggcatc
accaaggatccggcaacgaggtcgatttgggcttatagcgagcgagctgttttcaagtac
aaagtaacgaaggaagataggaacgtttggcaggtatacgtcgataagggtgagtttgaa
ctggctaagcagtattgcagagacaacccggcgcacatcgatcaagtgctcgtgaaacag
gcggaaatgctcttcaagaataaagaatacgagaagagcgcgctaatatacgctgatact
cactcgtctttcgaggaggtctccttgaagtttctgcaggagtggcaaattgaagccctg
aaaacgtttctgcgcaagaaactcgacggtttgaagacgcaagacaagacgcagataaca
atgattgtcatttgggtgacggaactgtttatgaatcaaatgggagctctgcgcagcagc
aacacgtcctacctccacgattcgcagtacacggaattgcagaagcagtttgacagcttt
ctcaccattcccaaagtcgaggaatgtatcaggagaaaccgtagcacgatatacgacttg
atggccagtcacggtgataaagacaatctgatatgtctgacaataatgcactgcaactac
gaggaggtgattcgtcagcacctgtacaagaataactacttggaggcactcggggtactc
aagagtcaaaacaataaggacctcttctatcaattcgccgggatattattacaagagctg
ccacggcccacggtggccgttttgatctcgcaaggatcgtcactgaagccggcgaagctt
ctgccagctttggtctcatgcaacagtgacgagaagcacgcaaaagaaattattaaatat
ttggagttttgcgtgtacaagcagggctcgcaggagcaagcaattcacaacttccttcta
tccttgtatgcgcgttacaagcagggcgaagtgatgcgatatataagctctcaaggtcag
gatatcagcatggtgcactatgacgtgcattacgcgttgcgtttgtgtcaggaggtaggc
ttgacggaagcctgcgtgcaattgtcggctttgctcggtctctggaccaccgccgtggat
ctcgcgctcacgatcagcgtagatctcgctaagcaaatcgccgctatgccatctgatcat
gataacgagttgaggaagaaactatggttgaagatagcggagcacgtggtacgagaaaaa
gacgacatacagcaagcaatggagtttttgcaacactgcgatttagttaggatagaagat
attctgccctttttctctgatttcgtcacgatcgatcatttcaaggaagctatttgcaat
tccctgcaggaatataaccagcatattcaagatcttaaggaagagatgcaggaagccacg
aaagcagcagaactaatacggaaggacattcaagtcttcagaaccagatgcaccttcgtg
catgcgcgggacacgtgtaatacatgcgaggtgcaactgttgctgagacccttctacgta
tttccctgcggtcataaatttcacagtgactgtttagtagcggcgttaacgccgatgctg
tctatggaccagaggacgaaactggcggatcttcagcgacaactcacggctatctcgaac
cggcccgaagacaccacttcgacgatctccgtgtcgttgtcgacgagggaccaaatcaag
gccgatatcgacgagctggtcgcctcggaatgcctctactgcggagagcttatgatagaa
tcgatagacaagccatttattgaggaagaggattacgaacgcgtgatgaaggaatggacg
tga
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