Temnothorax nylanderi: 139777961
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Entry
139777961 CDS
T11678
Symbol
Lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tny Temnothorax nylanderi
Pathway
tny03018
RNA degradation
tny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139777961 (Lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
139777961 (Lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tny03019
]
139777961 (Lsm7)
03041 Spliceosome [BR:
tny03041
]
139777961 (Lsm7)
Messenger RNA biogenesis [BR:
tny03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139777961 (Lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
139777961 (Lsm7)
Spliceosome [BR:
tny03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139777961 (Lsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
139777961
NCBI-ProteinID:
XP_071571776
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MSAPKQQQNVEHKEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNT
KEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccgaaacagcaacagaatgtcgagcataaagagaaaaagagaaaagagagt
attcttgatctgtccaagtatctcgagaagaatataagggtgaagttcgccggtggcaga
gaagccgaaggtatacttaaaggttatgatcctttactcaacctggtactcgacaacaca
aaggaatatcttagagatccagatgacccatataaattgaatcaagacactcgtatgcta
ggcttggtggtgtgcagaggaacatccgtagtgcttatctgtcctgtagatggcatggaa
tctattcagaatccgtttatacaacaagaaggatag
DBGET
integrated database retrieval system
