KEGG   Temnothorax nylanderi: 139786931
Entry
139786931         CDS       T11678                                 
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tny  Temnothorax nylanderi
Pathway
tny03030  DNA replication
tny03410  Base excision repair
tny03420  Nucleotide excision repair
tny03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tny00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139786931 (Rfc4)
   03410 Base excision repair
    139786931 (Rfc4)
   03420 Nucleotide excision repair
    139786931 (Rfc4)
   03430 Mismatch repair
    139786931 (Rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tny03032]
    139786931 (Rfc4)
   03036 Chromosome and associated proteins [BR:tny03036]
    139786931 (Rfc4)
   03400 DNA repair and recombination proteins [BR:tny03400]
    139786931 (Rfc4)
DNA replication proteins [BR:tny03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    139786931 (Rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    139786931 (Rfc4)
Chromosome and associated proteins [BR:tny03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    139786931 (Rfc4)
DNA repair and recombination proteins [BR:tny03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     139786931 (Rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    139786931 (Rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_lid_RFC1 AAA_16 AAA_assoc_2 Viral_helicase1 Mg_chelatase nSTAND_NTPase5 Rad17 AAA_11 AAA_18 nSTAND3 RuvB_N AAA_24 AAA_19 ABC_tran NTPase_1 RNA_helicase MeaB DNAX_ATPase_lid MipZ AAA_28 AAA_25 AAA_5 IstB_IS21 AAA_3 Hi1a-like
Other DBs
NCBI-GeneID: 139786931
NCBI-ProteinID: XP_071582133
LinkDB
Position
Unknown
AA seq 347 aa
MAGDSAVDEAMEILPSTSNGDAKIRERDGKSAKLPWIEKYRPQVFSDIVGNEDTVSRLGV
FAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGPLFKDAVLELNASNERGIDVVRNKIKM
FAQKKVNLPRGKHKIIILDEADSMTDGAQQALRRTMEIYSQTTRFALACNNTEEIIEPIQ
SRCAMLRYGKLTDAQVLAKVLEVCEKENVSYTDDGMEAIVFTAQGDMRQALNNLQSTYNG
FNHVNAENVFKVCDEPHPLIVKEMLDDCIKGDVSKACTVMDHFWKMGYSAEDIISNVFKV
CKNHTMDEKLKLKFVKEIGITHMGVVEGINSLLQLHALVARLCRACT
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcaggtgacagtgctgttgacgaagctatggagattttaccgtccacgagcaacggt
gacgcgaagatcagggagagagatggtaaatctgcaaaattaccgtggattgaaaaatat
cggcctcaagtattttccgacattgttggcaacgaagacactgtatctagattaggtgtc
tttgctcagcatggaaatactccaaatatcatcatcgctggcccgcctggagtgggtaaa
actaccacgattttatgtttggctcgtactctattgggaccattgttcaaagatgctgta
ctcgaactgaacgcttcaaacgagagagggattgatgtagttagaaataaaatcaaaatg
tttgctcagaaaaaggttaatcttccaagaggaaagcataaaatcatcattttagacgaa
gccgacagcatgactgacggcgcgcaacaggcattacgtcgtacgatggaaatttatagc
caaacaactagatttgctctcgcgtgcaacaacacagaggagattatcgaacctatacaa
tcacgttgcgctatgttaagatatggaaagttaacggatgcccaagtcttggccaaagtt
ctcgaagtctgcgaaaaagagaatgtttcctacacagatgacggtatggaagcaatagta
tttacagctcaaggggacatgagacaagccctaaataatctgcagtccacatacaatgga
tttaatcacgtgaatgcagaaaatgtatttaaagtctgtgatgagcctcatccgttaatt
gtcaaagagatgctggatgattgtataaagggcgatgtttctaaagcatgcacggtaatg
gatcatttctggaagatgggatattctgccgaagatataatcagcaacgtattcaaagtt
tgtaaaaatcacaccatggacgagaaactgaaactgaaatttgtcaaggaaattggaata
acacatatgggagtggtagaaggtatcaacagtttgttacagttacacgctttagtggca
agactttgccgcgcatgcacatga

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