Temnothorax nylanderi: 139786931
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Entry
139786931 CDS
T11678
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tny Temnothorax nylanderi
Pathway
tny03030
DNA replication
tny03410
Base excision repair
tny03420
Nucleotide excision repair
tny03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139786931 (Rfc4)
03410 Base excision repair
139786931 (Rfc4)
03420 Nucleotide excision repair
139786931 (Rfc4)
03430 Mismatch repair
139786931 (Rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tny03032
]
139786931 (Rfc4)
03036 Chromosome and associated proteins [BR:
tny03036
]
139786931 (Rfc4)
03400 DNA repair and recombination proteins [BR:
tny03400
]
139786931 (Rfc4)
DNA replication proteins [BR:
tny03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139786931 (Rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
139786931 (Rfc4)
Chromosome and associated proteins [BR:
tny03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139786931 (Rfc4)
DNA repair and recombination proteins [BR:
tny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139786931 (Rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
139786931 (Rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_lid_RFC1
AAA_16
AAA_assoc_2
Viral_helicase1
Mg_chelatase
nSTAND_NTPase5
Rad17
AAA_11
AAA_18
nSTAND3
RuvB_N
AAA_24
AAA_19
ABC_tran
NTPase_1
RNA_helicase
MeaB
DNAX_ATPase_lid
MipZ
AAA_28
AAA_25
AAA_5
IstB_IS21
AAA_3
Hi1a-like
Motif
Other DBs
NCBI-GeneID:
139786931
NCBI-ProteinID:
XP_071582133
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MAGDSAVDEAMEILPSTSNGDAKIRERDGKSAKLPWIEKYRPQVFSDIVGNEDTVSRLGV
FAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGPLFKDAVLELNASNERGIDVVRNKIKM
FAQKKVNLPRGKHKIIILDEADSMTDGAQQALRRTMEIYSQTTRFALACNNTEEIIEPIQ
SRCAMLRYGKLTDAQVLAKVLEVCEKENVSYTDDGMEAIVFTAQGDMRQALNNLQSTYNG
FNHVNAENVFKVCDEPHPLIVKEMLDDCIKGDVSKACTVMDHFWKMGYSAEDIISNVFKV
CKNHTMDEKLKLKFVKEIGITHMGVVEGINSLLQLHALVARLCRACT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgacagtgctgttgacgaagctatggagattttaccgtccacgagcaacggt
gacgcgaagatcagggagagagatggtaaatctgcaaaattaccgtggattgaaaaatat
cggcctcaagtattttccgacattgttggcaacgaagacactgtatctagattaggtgtc
tttgctcagcatggaaatactccaaatatcatcatcgctggcccgcctggagtgggtaaa
actaccacgattttatgtttggctcgtactctattgggaccattgttcaaagatgctgta
ctcgaactgaacgcttcaaacgagagagggattgatgtagttagaaataaaatcaaaatg
tttgctcagaaaaaggttaatcttccaagaggaaagcataaaatcatcattttagacgaa
gccgacagcatgactgacggcgcgcaacaggcattacgtcgtacgatggaaatttatagc
caaacaactagatttgctctcgcgtgcaacaacacagaggagattatcgaacctatacaa
tcacgttgcgctatgttaagatatggaaagttaacggatgcccaagtcttggccaaagtt
ctcgaagtctgcgaaaaagagaatgtttcctacacagatgacggtatggaagcaatagta
tttacagctcaaggggacatgagacaagccctaaataatctgcagtccacatacaatgga
tttaatcacgtgaatgcagaaaatgtatttaaagtctgtgatgagcctcatccgttaatt
gtcaaagagatgctggatgattgtataaagggcgatgtttctaaagcatgcacggtaatg
gatcatttctggaagatgggatattctgccgaagatataatcagcaacgtattcaaagtt
tgtaaaaatcacaccatggacgagaaactgaaactgaaatttgtcaaggaaattggaata
acacatatgggagtggtagaaggtatcaacagtttgttacagttacacgctttagtggca
agactttgccgcgcatgcacatga
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integrated database retrieval system