Thermodesulfovibrio obliviosus: V4D31_02185
Help
Entry
V4D31_02185 CDS
T10572
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tob Thermodesulfovibrio obliviosus
Pathway
tob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V4D31_02185 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tob03019
]
V4D31_02185 (pnp)
03016 Transfer RNA biogenesis [BR:
tob03016
]
V4D31_02185 (pnp)
Enzymes [BR:
tob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V4D31_02185 (pnp)
Messenger RNA biogenesis [BR:
tob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V4D31_02185 (pnp)
Transfer RNA biogenesis [BR:
tob03016
]
Prokaryotic type
tRNA degradation factors
V4D31_02185 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XCH48979
UniProt:
A0AAU8H673
LinkDB
All DBs
Position
complement(441038..443131)
Genome browser
AA seq
697 aa
AA seq
DB search
MEVELDIKGKKLILQTGVFAKQTNGSVLVKYGDTYVLCTIVAEKTPNEGVDFVPLTIDYQ
EKAYSAGKIPGGFFKREGKPTDREILVSRLIDRPIRPLFPEGFNYETQGIASVLSYGDEN
IADILSIIGISAALTISDIPFNGPVGAVRVGLIGEKFVLNPDNEESEKSSLNLVVAGTEE
AVTMVEGSAQECSEEILIEALKFAHTHIKETIAIQKKLALLAGKSKREIKAQEDENLKEA
ILNIISGKIENALFLQKKLERQQALEELLNECIQNLSTEEIDFLKISSAFDKVVKKIMRQ
RIVKKGLRVDGRKPDEIRPITCMVGILPRVHGSALFTRGETQALVATTLGTSEDEQKVDS
LEGEIFKTFMLHYNFLPFSVGEVKPLRAPGRREIGHGYLAERALQYVIPSKDEFPYTIRV
VSDILESNGSSSMATVCGASLSLMDAGVPIKAHVAGVAMGLIKEDDEVVILTDILGMEDH
YGDMDFKVAGTEKGITAFQMDVKIPGIDYEIFKKALGQAKHARLFILEKMYETISQPKEL
SPYAPRIYKIQVKPEKIRDIIGTGGRVIKSIIEETGVKIDIEDKEGIIKIASSQEASALR
AIEIIKGITQEAELGRIYMGKVTRIADFGAFVEIMPGVEGLLHISQIADKRIHKVSEVLK
VGDEIPVKVIEIDELGRVRLSRKEALREIEARTIAKN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaactggatattaaagggaaaaaacttattttacagacaggcgtttttgca
aaacaaacaaatggctcagttttagtaaaatatggtgatacatatgtattatgtactata
gttgctgaaaaaactcctaatgaaggagtagattttgttccactaaccattgactatcag
gaaaaagcctattctgcaggtaaaattccaggaggtttttttaaaagagaaggtaaacca
acggatagagaaattctggtttcccgtctgattgacaggcctataaggcctcttttccct
gaaggatttaattatgaaacccagggaattgcctctgttctttcttatggagatgaaaac
attgcggatattctaagtataattggaatttcagctgctttgactatatctgatattcca
tttaatggacctgtgggagctgtgagagttggtctaattggagaaaagtttgttttaaat
cctgacaatgaagaatctgaaaaaagcagcctcaatcttgtggttgcaggcacagaagaa
gctgttaccatggttgaaggtagcgctcaagagtgttctgaagaaattctaatagaagct
ttaaagtttgctcacactcatataaaagaaacaatcgctatccagaaaaaacttgctctt
ttagcaggaaaatcaaaaagagaaattaaagcccaagaagatgaaaatctcaaagaagcc
attttaaatatcatttcaggaaaaattgaaaatgccttatttctacaaaaaaagcttgaa
agacagcaggcgcttgaggaactacttaatgaatgcatacaaaatttaagtacagaagag
atagatttcctcaagattagtagtgcctttgataaagtagtaaaaaaaattatgcgccag
agaattgtaaaaaaaggactgagagtggatggtagaaaacctgatgaaataagaccaatt
acatgcatggtgggaatattaccaagagttcatggttctgctttatttacaagaggagaa
acacaggcacttgttgcaacaactcttggcacttcagaagatgaacaaaaagttgattct
cttgaaggagaaatatttaaaacatttatgcttcattataatttcttgccattcagtgta
ggagaagttaagcccttacgagcacctggaagaagagaaattggtcatggatatcttgca
gagagagctctacagtatgtaattccttctaaggacgaatttccatataccataagagtt
gtatcagacattcttgaatcaaatggttcatcctcaatggcaactgtatgcggagcaagt
ctttctttgatggatgcaggagttccaataaaagctcatgtagcaggggttgcgatgggc
ctcattaaagaggacgatgaagttgtgatacttactgacatactcgggatggaagaccat
tatggtgatatggatttcaaagtagcaggaactgaaaaaggtataacagcctttcagatg
gatgtgaagattcctggcatagattatgaaatatttaaaaaagctttagggcaggcaaag
catgcaagattatttattctcgaaaaaatgtatgaaaccatcagtcagccaaaagagctt
tctccatatgctccaagaatatataaaatacaggtcaaacctgaaaaaattagagatata
attggcacaggaggaagggtaattaaaagcattatagaagaaacaggggtaaaaatagac
attgaagataaagagggaattatcaaaattgcatcttcccaagaagcttcagctctacga
gccattgagatcattaaaggaattactcaggaagcagaactgggaagaatttacatgggt
aaagtaacaagaatagcagattttggagcttttgttgaaataatgccaggagttgaagga
ttactacatatatctcaaattgctgataaaagaattcataaagtatctgaagtactaaaa
gtgggagatgagattcctgtaaaagtaattgaaattgacgaacttggaagggttcgcctg
agcagaaaagaggctttaagagaaattgaagccagaactatcgcaaaaaattaa
DBGET
integrated database retrieval system
