KEGG   Thermodesulfovibrio obliviosus: V4D31_02355
Entry
V4D31_02355       CDS       T10572                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tob  Thermodesulfovibrio obliviosus
Pathway
tob03030  DNA replication
tob03410  Base excision repair
tob03420  Nucleotide excision repair
tob03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V4D31_02355 (polA)
   03410 Base excision repair
    V4D31_02355 (polA)
   03420 Nucleotide excision repair
    V4D31_02355 (polA)
   03440 Homologous recombination
    V4D31_02355 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tob03032]
    V4D31_02355 (polA)
   03400 DNA repair and recombination proteins [BR:tob03400]
    V4D31_02355 (polA)
Enzymes [BR:tob01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V4D31_02355 (polA)
DNA replication proteins [BR:tob03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     V4D31_02355 (polA)
DNA repair and recombination proteins [BR:tob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     V4D31_02355 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     V4D31_02355 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 HHH_2 bHLH_HIF1A Yopt Sp-DndD Methyltransf_4
Other DBs
NCBI-ProteinID: XCH49011
UniProt: A0AAU8H2W4
LinkDB
Position
complement(474248..476734)
AA seq 828 aa
MQEIYLLDGSCFVYRAYHAIKGLSNSRGIPTNAVYGFTRMLLKLLKEKNIEYMLCAFDSP
HPTKRHKIYEEYKITRPETPKDLPLQIEYIKEIVDALGIKRIEIPGYEADDIVASVIFKL
QPSGFFYIVSLDKDMLQLVSQNVKIYDPFNNIIIDEKYVINKYGISPEKLNDFMAMVGDS
IDNIPGVKGIGEKTALELLKRYGSVENIIKNLDIIKPSKVADILRKNIEAVKLSKELVML
KKDAPVEIKLEELKIKKQNTEKLAKIFRELEFTSLLKQTMQLYIKPQIEKSENKKTDVQT
LLKKIKEKGSFSVSIDENTLNVGINGDVYEISLDDSELILSSRALKVLFNVKETLRRLKN
SGIRLEPPYFDLMIAAYLINPNRGKYNFDELVLEYLGKFYNDSQNSVCYMRELYEKLNNE
LKEKELEKLYFDIEMPLIEVLFHMEEAGIKVDLEKLEALTRIVSTEIDKIKEKIYRIAGK
QFNINSPRQLAEILYDRLGLKSRKRGKKARSTEMEVLEELATQHELPQEVINHRILNKLL
TAYLIPLRDCVNPETQRIHTKWSQTVAGTGRIISSEPNLQNIPVKGQWAEFLREVFIPED
GYLFMSADYSQIELRLLAHMSNDTSLIKAFHEGKDIHRATASEIFSIPEEAVTEDHRRIA
KTVNFGISYGISPFGLSDSIKIPYEKAQELIELYFLRYPMVKKFIEETISFARKNGYVKT
LFGRIRPLPEINSPNQFLKMQAERIAVNATIQGTAADIIKIAMIRIYRHLKTKNMNARLI
LQIHDEIVLEVKENIIEEVKEIVKNEMKNFDLKVPLEVNIFTGKNLNL
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgcaagaaatttatctgcttgatggaagctgttttgtttacagagcctatcatgctata
aaaggactgagtaacagtcgtggtatcccaacaaatgctgtttatggttttacaagaatg
cttcttaagcttcttaaagaaaaaaatatcgaatacatgctttgtgcctttgacagtccc
catccaactaaaaggcataaaatatatgaagaatataaaataacaaggcctgagacaccc
aaggatttaccactccagattgaatatataaaagagattgttgatgctctgggtatcaaa
agaatagaaattcccggatacgaagctgatgatatagtagcctctgtcatttttaaactt
cagccttcaggatttttttatatcgttagtcttgacaaagacatgctacagcttgtctcg
cagaatgtaaaaatctatgaccctttcaataacattataattgatgaaaagtatgtcatt
aataaatacggaatttctcctgaaaaacttaatgattttatggctatggtgggtgactct
attgacaacattccaggagtaaaaggaattggagaaaaaacagctttagagcttttaaag
agatatggctctgtggaaaacatcattaaaaatcttgatattataaaaccttcaaaggtc
gcagacattttaagaaaaaacattgaagcggtgaagctcagtaaagaacttgtaatgtta
aaaaaggatgctcctgttgaaattaaacttgaggagcttaaaataaagaagcagaacacg
gaaaaacttgctaaaatttttcgtgaacttgaattcacaagccttctaaagcagacaatg
caactttatataaagccacagatagaaaaatcagaaaacaaaaaaactgatgttcaaaca
ttacttaaaaaaataaaagaaaaaggaagtttttcagtatcaattgatgaaaatactctt
aatgttggtattaatggagatgtatatgaaatatcccttgatgattcagaattgattctg
tcttctcgagcattaaaagttttattcaatgtaaaggaaacactcaggagattgaaaaat
tcaggcatcagacttgaacctccttactttgatcttatgatagcagcatatcttataaat
ccaaacagaggtaaatataattttgatgagcttgtgcttgaatatcttggcaagttctat
aatgattctcaaaattctgtttgttatatgcgtgagctttatgaaaaattaaacaacgaa
ttaaaagaaaaggagcttgaaaaactttattttgatattgagatgcctcttattgaagta
ctcttccacatggaggaagcaggaataaaggttgatcttgaaaaacttgaagctcttacc
agaattgtatctacagagattgataaaatcaaggaaaaaatttacagaattgcagggaaa
cagtttaatattaactcaccaagacagctggcagaaattctatatgacaggcttggactt
aagagcagaaaaagaggtaaaaaggctcgttcaacagaaatggaagttcttgaagagctt
gccacacaacatgaactgcctcaggaagtaatcaatcatcgcatactaaataagcttttg
acagcttatttaattcctctcagagattgtgtaaatcctgaaacacaaagaattcataca
aaatggtctcaaaccgtagcaggaacaggaagaattatcagcagtgagcctaatttacag
aacattcctgtaaagggacaatgggcagagttcttaagagaagtctttatacctgaagat
ggatatctgtttatgagtgctgattattctcagattgagttaagacttctggctcatatg
agtaatgatacttctctaatcaaagcatttcatgaaggaaaggatattcacagagcaaca
gcatctgagattttttcaatacctgaagaagctgttacagaggatcatagaagaattgca
aagactgtaaatttcggcatttcttatggaataagtccctttggactgtctgactcaata
aaaattccctatgaaaaggctcaggaactgattgagctctattttttaagatatccaatg
gtgaaaaaatttattgaggaaacaatttcttttgcaagaaaaaatggctacgtaaaaact
ctttttggaagaattcgccccctgccagaaattaacagtccaaatcagtttttaaaaatg
caggcagaaagaatagcagtgaacgctactattcagggaactgcagcagacattataaaa
attgcaatgataagaatatacagacatcttaaaacaaaaaatatgaatgcaaggcttatt
cttcagattcatgatgagatagttcttgaagtgaaagaaaatatcattgaagaggtgaaa
gaaattgtcaagaatgaaatgaaaaattttgatctcaaagtgcctcttgaggtcaacatc
tttacaggtaaaaatctaaatttataa

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