Thermodesulfovibrio obliviosus: V4D31_02355
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Entry
V4D31_02355 CDS
T10572
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tob Thermodesulfovibrio obliviosus
Pathway
tob03030
DNA replication
tob03410
Base excision repair
tob03420
Nucleotide excision repair
tob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V4D31_02355 (polA)
03410 Base excision repair
V4D31_02355 (polA)
03420 Nucleotide excision repair
V4D31_02355 (polA)
03440 Homologous recombination
V4D31_02355 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tob03032
]
V4D31_02355 (polA)
03400 DNA repair and recombination proteins [BR:
tob03400
]
V4D31_02355 (polA)
Enzymes [BR:
tob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V4D31_02355 (polA)
DNA replication proteins [BR:
tob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V4D31_02355 (polA)
DNA repair and recombination proteins [BR:
tob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V4D31_02355 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V4D31_02355 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
bHLH_HIF1A
Yopt
Sp-DndD
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
XCH49011
UniProt:
A0AAU8H2W4
LinkDB
All DBs
Position
complement(474248..476734)
Genome browser
AA seq
828 aa
AA seq
DB search
MQEIYLLDGSCFVYRAYHAIKGLSNSRGIPTNAVYGFTRMLLKLLKEKNIEYMLCAFDSP
HPTKRHKIYEEYKITRPETPKDLPLQIEYIKEIVDALGIKRIEIPGYEADDIVASVIFKL
QPSGFFYIVSLDKDMLQLVSQNVKIYDPFNNIIIDEKYVINKYGISPEKLNDFMAMVGDS
IDNIPGVKGIGEKTALELLKRYGSVENIIKNLDIIKPSKVADILRKNIEAVKLSKELVML
KKDAPVEIKLEELKIKKQNTEKLAKIFRELEFTSLLKQTMQLYIKPQIEKSENKKTDVQT
LLKKIKEKGSFSVSIDENTLNVGINGDVYEISLDDSELILSSRALKVLFNVKETLRRLKN
SGIRLEPPYFDLMIAAYLINPNRGKYNFDELVLEYLGKFYNDSQNSVCYMRELYEKLNNE
LKEKELEKLYFDIEMPLIEVLFHMEEAGIKVDLEKLEALTRIVSTEIDKIKEKIYRIAGK
QFNINSPRQLAEILYDRLGLKSRKRGKKARSTEMEVLEELATQHELPQEVINHRILNKLL
TAYLIPLRDCVNPETQRIHTKWSQTVAGTGRIISSEPNLQNIPVKGQWAEFLREVFIPED
GYLFMSADYSQIELRLLAHMSNDTSLIKAFHEGKDIHRATASEIFSIPEEAVTEDHRRIA
KTVNFGISYGISPFGLSDSIKIPYEKAQELIELYFLRYPMVKKFIEETISFARKNGYVKT
LFGRIRPLPEINSPNQFLKMQAERIAVNATIQGTAADIIKIAMIRIYRHLKTKNMNARLI
LQIHDEIVLEVKENIIEEVKEIVKNEMKNFDLKVPLEVNIFTGKNLNL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaatttatctgcttgatggaagctgttttgtttacagagcctatcatgctata
aaaggactgagtaacagtcgtggtatcccaacaaatgctgtttatggttttacaagaatg
cttcttaagcttcttaaagaaaaaaatatcgaatacatgctttgtgcctttgacagtccc
catccaactaaaaggcataaaatatatgaagaatataaaataacaaggcctgagacaccc
aaggatttaccactccagattgaatatataaaagagattgttgatgctctgggtatcaaa
agaatagaaattcccggatacgaagctgatgatatagtagcctctgtcatttttaaactt
cagccttcaggatttttttatatcgttagtcttgacaaagacatgctacagcttgtctcg
cagaatgtaaaaatctatgaccctttcaataacattataattgatgaaaagtatgtcatt
aataaatacggaatttctcctgaaaaacttaatgattttatggctatggtgggtgactct
attgacaacattccaggagtaaaaggaattggagaaaaaacagctttagagcttttaaag
agatatggctctgtggaaaacatcattaaaaatcttgatattataaaaccttcaaaggtc
gcagacattttaagaaaaaacattgaagcggtgaagctcagtaaagaacttgtaatgtta
aaaaaggatgctcctgttgaaattaaacttgaggagcttaaaataaagaagcagaacacg
gaaaaacttgctaaaatttttcgtgaacttgaattcacaagccttctaaagcagacaatg
caactttatataaagccacagatagaaaaatcagaaaacaaaaaaactgatgttcaaaca
ttacttaaaaaaataaaagaaaaaggaagtttttcagtatcaattgatgaaaatactctt
aatgttggtattaatggagatgtatatgaaatatcccttgatgattcagaattgattctg
tcttctcgagcattaaaagttttattcaatgtaaaggaaacactcaggagattgaaaaat
tcaggcatcagacttgaacctccttactttgatcttatgatagcagcatatcttataaat
ccaaacagaggtaaatataattttgatgagcttgtgcttgaatatcttggcaagttctat
aatgattctcaaaattctgtttgttatatgcgtgagctttatgaaaaattaaacaacgaa
ttaaaagaaaaggagcttgaaaaactttattttgatattgagatgcctcttattgaagta
ctcttccacatggaggaagcaggaataaaggttgatcttgaaaaacttgaagctcttacc
agaattgtatctacagagattgataaaatcaaggaaaaaatttacagaattgcagggaaa
cagtttaatattaactcaccaagacagctggcagaaattctatatgacaggcttggactt
aagagcagaaaaagaggtaaaaaggctcgttcaacagaaatggaagttcttgaagagctt
gccacacaacatgaactgcctcaggaagtaatcaatcatcgcatactaaataagcttttg
acagcttatttaattcctctcagagattgtgtaaatcctgaaacacaaagaattcataca
aaatggtctcaaaccgtagcaggaacaggaagaattatcagcagtgagcctaatttacag
aacattcctgtaaagggacaatgggcagagttcttaagagaagtctttatacctgaagat
ggatatctgtttatgagtgctgattattctcagattgagttaagacttctggctcatatg
agtaatgatacttctctaatcaaagcatttcatgaaggaaaggatattcacagagcaaca
gcatctgagattttttcaatacctgaagaagctgttacagaggatcatagaagaattgca
aagactgtaaatttcggcatttcttatggaataagtccctttggactgtctgactcaata
aaaattccctatgaaaaggctcaggaactgattgagctctattttttaagatatccaatg
gtgaaaaaatttattgaggaaacaatttcttttgcaagaaaaaatggctacgtaaaaact
ctttttggaagaattcgccccctgccagaaattaacagtccaaatcagtttttaaaaatg
caggcagaaagaatagcagtgaacgctactattcagggaactgcagcagacattataaaa
attgcaatgataagaatatacagacatcttaaaacaaaaaatatgaatgcaaggcttatt
cttcagattcatgatgagatagttcttgaagtgaaagaaaatatcattgaagaggtgaaa
gaaattgtcaagaatgaaatgaaaaattttgatctcaaagtgcctcttgaggtcaacatc
tttacaggtaaaaatctaaatttataa
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