Thermodesulfovibrio obliviosus: V4D31_02895
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Entry
V4D31_02895 CDS
T10572
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tob Thermodesulfovibrio obliviosus
Pathway
tob03030
DNA replication
tob03430
Mismatch repair
tob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V4D31_02895
03430 Mismatch repair
V4D31_02895
03440 Homologous recombination
V4D31_02895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tob03032
]
V4D31_02895
03400 DNA repair and recombination proteins [BR:
tob03400
]
V4D31_02895
Enzymes [BR:
tob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V4D31_02895
DNA replication proteins [BR:
tob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V4D31_02895
DNA repair and recombination proteins [BR:
tob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V4D31_02895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HIN
HROB
DUF6282
CcmE
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XCH49116
UniProt:
A0AAU8H5Q2
LinkDB
All DBs
Position
570909..574310
Genome browser
AA seq
1133 aa
AA seq
DB search
MSIHEFVHLHVHTEYSLLDGAIRIDELVEQAKKYNMPAVAITDHGNLFGVVEFYKKATKA
GIKPIIGCEVYVAPQSRFDKTKIKAPGMPEEASFHLTLLVENEEGYRNLTRLVTLAYTEG
FYYKPRIDMELLNQYYRGLIALSGCLKGEIPHSIVHGNIDRAEKTAKELKDLFGENFFLE
IQSNSLVEQEIANKGLIEISKKFNIPLVATNDCHYLYRSDARAHEILLCIQTGKTIKDET
RLKFQTDEFYFKSPEEIYSAFIEIPQALKNTLEIADRCNFHFKLGEYKLPKYHVPDGYSA
EEYLKQLAQEGLKERFNGNIPEDYINRLEEELKVITKMGFASYFLIVWDFINYARRKKIP
VGPGRGSVAGSLVAYALKITDIDPIKYGLLFERFLNPERISMPDIDVDFCKDRREEVIKY
VTEKYGVDRVAHIITFGTMAARAVVRDVGRALNIPYGDVDKIAKMIPFACPSLQQALNLE
PRLKELYDKSETIKELIDIALRLEGLVRHSSQHAAGVVISPEPLEDIMPLYKNPGEETVI
SQFDMKALEDIGLLKFDFLGLKTLTVIDDTIKYVKAQGKELKLENIPLDDKETYQLLCSG
QTTGVFQLESRGMRELLKRVEPQRFEDLIALVALYRPGPLGSGMVDDFIKRKKGLVPIHY
DLPELKEILDETYGVILYQEQVMKIANKIAGFTMGQADVLRKAMGKKIPELLMSLKEEFV
QGAIRNGVTQDKAEALFNIMAAFAEYGFNKSHSAAYAYLAYITAYLKVHYPKEFFAANLS
NEMGDTNKIVKFINECKAWGIEIKGPDINESDRVFTVRENSIRFGLEAVKGVGGSALQCI
LNERKKKKFTSMTDFLSRVDTRKVNKKVIESLIKAGAFDSLYPQYTANQARAIAMHELLS
FKGNKLPGGLFFNEQIIEPWDNETVLSEEKTALGFYLTGHPMKPLRAVLNRMGICTIADI
FDTAEDEIIEIEQEQEIKIAGIVEEVKSKAKEKGVTAYITIEDETGRVEVVIYPELFKKC
SNILTEKNSIIINGIVFKSPDSTKFLARQIEDMKNLDLKIKYELSVDCSDMEKAYKTLKE
IRQCLEETRNGEGKVYICLNLADCHVIILSPFEPCLDFETKIQKIENCQVRIL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcatgagtttgtccatcttcatgtacatacagaatatagtctccttgatgga
gcaataagaattgatgaattagttgaacaggcaaagaaatacaatatgcctgctgtggca
ataactgatcatggaaatctttttggagtagtggaattttataaaaaagccactaaagca
gggataaaacctattataggttgtgaggtatatgtagctcctcagagtcgttttgataaa
acaaagataaaagcaccaggaatgccagaggaagcatcatttcatcttactttgttggtg
gaaaacgaggaaggatacaggaatcttacccgacttgttactctggcttatactgaaggg
ttttactacaaaccaagaattgatatggagcttttaaatcaatactatagaggacttatt
gctctttctggatgtcttaaaggagaaatcccacacagtattgttcatggaaacattgat
agagctgaaaagacagcaaaagaattaaaagacctatttggagagaactttttccttgaa
atccagtcaaacagccttgttgaacaggagattgcaaataaaggattaattgagatttca
aaaaaatttaatattcctttggttgctaccaatgactgtcactatctttacaggtcagat
gcaagggcacatgaaattctgctttgcatccagactggcaaaactataaaagacgaaaca
agactgaagtttcaaacagacgagttttactttaaatctccagaggagatttattcagca
tttattgaaattcctcaggcactgaaaaatactcttgagattgcagatagatgtaacttc
cattttaaacttggtgaatacaagcttccaaaataccatgttcccgacggatactcagca
gaagaatatttaaaacaacttgctcaggaaggattaaaagagagatttaatggcaatatc
cctgaggattatataaatcgtctggaagaagaactcaaagttataacaaaaatgggtttt
gcttcatattttctcattgtatgggattttataaattatgcgagaagaaaaaaaatccct
gttggacctggaaggggttcagtagcaggaagccttgttgcttatgcactcaagattacc
gatatagatcccataaaatacgggctactttttgaaagatttttaaatcctgaaagaata
agcatgcctgatattgatgtggatttctgtaaggacagaagagaggaagtaattaaatat
gttacagaaaaatatggagttgacagagttgcacacattataacttttggaacaatggct
gcaagagcagttgtaagagatgtggggagagcattaaacattccctatggtgatgtagat
aaaattgccaaaatgataccatttgcatgtccatctttacagcaagctttaaatttagaa
ccaagactcaaggaactttacgataaatctgaaacgataaaagaattaattgacatagct
ttaagacttgaaggacttgtaagacactcatctcaacatgctgcaggcgttgttatttct
cctgagcctcttgaagatataatgccgctttataaaaatccaggtgaagagactgtaata
agccagtttgatatgaaagccctggaagatattggattgcttaaatttgactttttaggt
cttaaaaccctcactgttattgatgacacaataaaatatgttaaagctcagggtaaagag
ctgaaattagaaaacattcctcttgatgataaggaaacatatcaacttctttgttcagga
cagacaacaggagtatttcagcttgaaagtagaggtatgagagaattactcaagagagta
gaacctcagagatttgaggacctcattgcccttgtagccttatacagacccggacccctt
ggcagtggtatggttgatgattttattaaaagaaaaaaaggactggttcccattcattac
gatctgccagagctaaaagaaatacttgatgaaacctatggagtaattctttatcaagag
caggttatgaaaattgccaataaaattgcagggtttacaatgggacaggcagatgtttta
agaaaggcaatgggtaaaaaaattccagaactgcttatgagtcttaaggaagagtttgtt
cagggagccataagaaacggagtgacacaggacaaagcagaagctttattcaatataatg
gcagctttcgctgagtatggttttaataaatcccattctgctgcctatgcttatttagca
tacattacagcttatttaaaagttcattatcctaaagaattctttgcagcaaacctttca
aatgaaatgggagatacaaataaaattgttaaatttataaatgaatgcaaagcatggggt
atagaaattaaaggacctgacataaacgaaagcgacagagtctttactgtaagggaaaat
tccataagattcggacttgaagctgtcaaaggagtaggaggctctgcccttcaatgtatt
ctcaatgaaaggaaaaagaaaaaatttacatcaatgactgatttcctgagcagagttgac
acaagaaaagttaacaaaaaagtgatagaatccctcattaaagcaggagcatttgattct
ctttatcctcaatacactgccaatcaggcaagagctattgcaatgcatgaacttttatcc
tttaaaggcaataaactacctggtggattattttttaatgagcaaattatagagccatgg
gataatgaaactgtactgagtgaggaaaagacagcgcttggtttttatcttacaggtcat
ccaatgaaaccgctgagagcagttttgaataggatggggatctgtacaattgctgatatt
tttgatactgcagaagatgagattattgaaattgaacaggagcaggagataaaaatagca
ggcattgtggaagaagtaaaaagtaaagcaaaggaaaaaggtgttactgcttacataaca
atagaagatgagacaggcagggttgaggttgtaatttatcctgaactttttaaaaaatgt
agcaatattttaacagaaaaaaactcaattatcattaatggcattgtatttaaatctcct
gattcaacaaaatttcttgcaagacagatagaagatatgaaaaatctggatttaaaaata
aagtatgaattaagtgttgactgttcagacatggagaaagcttataaaactttgaaagaa
ataagacaatgtcttgaagaaacccgtaatggagaaggcaaagtatatatatgtttaaat
cttgctgactgtcatgttataattttaagtccttttgaaccgtgccttgattttgaaaca
aaaatacaaaaaattgaaaattgtcaggtgagaatattatga
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