Thermodesulfovibrio obliviosus: V4D31_03960
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Entry
V4D31_03960 CDS
T10572
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tob Thermodesulfovibrio obliviosus
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tob03009
]
V4D31_03960 (rimO)
Enzymes [BR:
tob01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V4D31_03960 (rimO)
Ribosome biogenesis [BR:
tob03009
]
Prokaryotic type
ribosomal protein modification factors
V4D31_03960 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XCH49324
UniProt:
A0AAU8H3E3
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Position
789862..791139
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AA seq
425 aa
AA seq
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MKKFTVITLGCPKNTVDSRHLIEELTAEGFLYVEEFKKADFVFINTCCFINDAKEESIDE
ILTVAKCKEHRKLIVIGCLSKRYKNELKKEIPEIDALFGVNETASIISFMRQFKNSDSYS
LICAYTMEPPSYRYIKIADGCSRRCSFCVIPSIRGPFKSREPEKILKEAEGFVSSGIKEL
IIVAQDITQYGKELKGYNLVSLLKDLCSINGDFWIRLLYLYPTDVDEAIIQTVAENDKIV
NYLDIPMQHSEERILRLMGRRGTKKEYFKKIRQIREAIPGVTLRSTFIVGFPTETEDEFQ
RLVDFIEEVQFDRLGVFKYSREEGTVAYNLKGQIPESVKNRRFDEIMTRQALISLEKNRA
LVGKKYDALIDYIDADLALARLYCHAPEIDGVVILENVSELKAADKVKVLITEAYEYDLK
GVIVK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttacagtaatcacacttggatgtcctaaaaacactgttgattcaagacat
ttaatagaggaactaacagcagaaggatttttatatgtggaggagtttaaaaaagcagat
tttgtttttatcaacacctgctgttttataaatgatgcaaaagaggaatcaattgacgaa
atcttaacagtagcgaagtgtaaagagcatagaaagcttattgtaattggttgtctttcc
aaaagatacaaaaatgaacttaaaaaagaaataccagaaattgatgctttatttggagta
aatgagacagcctctattattagtttcatgaggcagtttaagaattctgacagttattcc
ttgatctgtgcttatactatggaaccaccaagttacagatatattaaaattgccgacggc
tgtagtcgtagatgcagtttttgtgttattccttcaataagaggtccttttaaaagcaga
gaacctgaaaaaatattaaaagaagccgagggttttgtttcctctggaataaaagagttg
attattgttgctcaggatattacccagtacggcaaagaattgaagggatacaatttagta
agtcttcttaaggatttatgctcaattaatggagatttttggattagacttctttacctt
tatcctactgatgttgatgaggctataatccaaacagtggcagaaaatgataaaattgtt
aattatcttgatataccaatgcaacacagtgaagaaagaatactgaggcttatgggcaga
aggggaacaaagaaggagtattttaaaaaaataaggcaaatcagggaagcaataccggga
gtaacattgagaagcacttttattgttggatttcccactgaaacagaagatgagtttcag
agactcgttgattttattgaagaagttcagtttgaccgtcttggagtttttaaatactca
agagaagaaggaacggtagcttacaatttaaaagggcagattcctgaaagtgtaaaaaat
agaagatttgatgagataatgacaaggcaggctttaatatcccttgaaaaaaatcgcgcc
cttgtggggaaaaaatatgatgccttgatagactatattgatgcagatcttgcccttgca
agactttactgccatgcaccagagattgatggtgtggtaatattagagaatgtgtcagag
ttaaaagcagcagataaagtaaaggttttgatcaccgaagcctatgaatatgaccttaaa
ggagttattgttaagtga
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