Thermodesulfovibrio obliviosus: V4D31_05620
Help
Entry
V4D31_05620 CDS
T10572
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tob Thermodesulfovibrio obliviosus
Pathway
tob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V4D31_05620 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tob01007
]
V4D31_05620 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tob03016
]
V4D31_05620 (lysS)
Enzymes [BR:
tob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
V4D31_05620 (lysS)
Amino acid related enzymes [BR:
tob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
V4D31_05620 (lysS)
Transfer RNA biogenesis [BR:
tob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
V4D31_05620 (lysS)
Prokaryotic type
Other AARSs
V4D31_05620 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
XCH47830
UniProt:
A0AAU8H0V8
LinkDB
All DBs
Position
1127489..1128970
Genome browser
AA seq
493 aa
AA seq
DB search
MQETPLSELIQQRIKKLETLRSLGIEPYNGVFNPEYSTEEIFIKFGNLDKEKLEQENIKA
SAAGRIILLRDFGKAAFAHIQDSKGRIQIYLRKDVLGEKFSLIKNLDIGDIVGVEGRLFR
TKTNELTIEVQEFVFLSKSLRPLPEKWHGLKDIEARYRQRYVDLIVNPSVKETFIKRQQI
IKYLREFLENEGFLEVETPVMHTIAGGARAKPFKTYHEALDMELYLRIAPELYLKRLLVG
GFERVFEIGKNFRNEGISTKHNPEFTMVEFYVAYKDYNWLMDFTEKLLVYIVEKIFGSLQ
VKYGDYTIDFTPPFKKITMYDALKTKGVPEETLKNMDFALKWAKDKGIEIPEGSSLSKVL
DEIFKEVVEPELIQPTFIIDYPVELSPLAKRKRDNPELVERFELFIAGREIANAFSELND
PIDQKERFLRQLEERLKGDEEVPEMDEDFVRALEIGMPPAAGEGIGIDRLVMILTDSHSI
RDVILFPLLRPEK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaacacctttatctgagcttatccagcagagaattaaaaaacttgaaacactg
agaagtcttggtattgaaccttacaatggagtttttaatcctgaatacagcactgaagaa
atttttataaaatttgggaatcttgataaagaaaaactggaacaggaaaacataaaagcc
tcagctgctggaagaataattcttttaagagattttggtaaagcagcctttgcccatata
caggattcaaagggaagaattcaaatttatcttagaaaagatgtcttaggagaaaaattt
tctttaattaagaatcttgatatcggcgatattgtcggtgttgaaggaagactttttaga
acaaaaacaaatgagttaactatagaagtgcaggaatttgtttttttaagtaaatccctt
aggcctcttccagaaaaatggcatggactcaaagatattgaggcaagatacaggcagaga
tatgttgaccttattgtaaatccgtcggtaaaggaaacttttataaagaggcagcaaatt
attaagtatttgagagagtttcttgaaaatgaaggattccttgaagttgaaacacctgtg
atgcatacaattgcaggaggtgcgagagcaaagccatttaaaacttatcatgaagctctt
gacatggagctttacttaagaattgcacctgagctttatctgaaaaggcttcttgtgggc
ggatttgaaagagtttttgaaataggtaagaattttagaaatgaaggaatatcaacgaag
cataatcctgaattcacaatggtagagttttatgtagcttacaaagactataactggctt
atggattttacagaaaagctattagtttacattgttgaaaaaatcttcggaagtcttcag
gtaaaatacggagattacacaattgatttcactccaccctttaaaaaaattaccatgtat
gatgccctgaagactaaaggtgtgccagaggagacattaaaaaacatggactttgcttta
aaatgggcaaaggacaaaggcatagaaattcctgagggaagctctctaagcaaggttctt
gacgagatatttaaagaagttgtagagcctgaacttattcagccaacatttattattgat
tatcctgttgagctttctcctttagcaaaaaggaaaagagacaatccagagcttgtagaa
agatttgagcttttcattgctggtagagaaattgcaaatgccttttctgagcttaatgac
cccattgatcagaaagaaagatttctccgtcagcttgaagaaagacttaaaggagatgaa
gaagtgcctgagatggatgaggattttgtgagagcccttgaaattggtatgcctccagca
gcaggagaaggtattggaatagataggcttgtgatgattttaactgacagtcactcaata
agagatgttatactgtttcctcttttaagacctgaaaaatga
DBGET
integrated database retrieval system
