Thermodesulfovibrio obliviosus: V4D31_06760
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Entry
V4D31_06760 CDS
T10572
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tob Thermodesulfovibrio obliviosus
Pathway
tob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V4D31_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tob03400
]
V4D31_06760
Enzymes [BR:
tob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
V4D31_06760
DNA repair and recombination proteins [BR:
tob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
V4D31_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Dit-like_CBM2
Motif
Other DBs
NCBI-ProteinID:
XCH48039
UniProt:
A0AAU8H2J6
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All DBs
Position
complement(1329751..1330593)
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AA seq
280 aa
AA seq
DB search
MRPVGVHTSVKNSLINSINEAVELQCTTFQIFLHSPRLWQIPEFSVEVIDEFKKLMQLYK
LNPLVVHASYLINLISSNPKTIASSRYLLKREVLMADVLGADYYVIHLKDNKDMEKEEIF
AKTREGFSKIGKLEKCKILIENTAKSKITALIPDLIETFKNVESEIIGGICIDTCHLFAA
GYDIANENGLKKFIEELSKYGSFDLIKLIHLNDSKAPAGSGIDRHEHIGKGYIGIKGFEN
FLKIKEISHVPLILETPKKSFDDDLKNLSTVREILKRLES
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgagaccagttggagttcacacttctgttaaaaacagcttaattaattctattaatgaa
gcagtagagcttcaatgcactacttttcagatatttcttcacagtccacggctatggcag
attccagagtttagcgtagaagttattgatgaattcaagaagcttatgcagctttacaag
ttgaatcctttagttgttcatgcctcttatctgataaatctcatttcatcaaacccaaaa
accattgcttcatcacggtatcttttaaaaagagaagttttaatggctgatgttcttggt
gcagactactacgtgatacatttaaaggacaataaagatatggaaaaagaagaaattttt
gcaaaaactcgtgaaggattcagcaaaattggaaagcttgagaaatgtaaaatcctcata
gaaaacacagcaaaaagcaagattacagcattaattcccgatttaattgaaacatttaaa
aatgttgagagtgaaattataggaggaatctgtattgacacatgtcatctctttgctgct
ggatatgacatagcaaatgaaaacggattaaaaaaattcattgaagagctttctaaatat
ggctcttttgatttgattaaattaattcatctcaatgattcaaaagcacctgcaggctct
ggtattgacaggcacgaacatattggaaaaggctatatcggcataaaaggctttgaaaac
tttttaaaaataaaagaaatctcccatgtgccacttattcttgaaacacctaaaaaatct
ttcgatgatgatttaaaaaatctttctactgtaagagaaatcctcaagaggttagaatcc
tga
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