| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
tob Thermodesulfovibrio obliviosus
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| Pathway |
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| Brite |
Enzymes [BR:tob01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V4D31_07300 (rpoC)
Transcription machinery [BR:tob03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V4D31_07300 (rpoC)
DNA repair and recombination proteins [BR:tob03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V4D31_07300 (rpoC)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1428915..1433030)
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| AA seq |
1371 aa
MTEDIYSLFQKPKNPRDFDAIRIKLASPEKIREWSYGEVKKPETINYRTFKPEPEGLFCA
KIFGPIKDWECLCGKYKRMKHKGVICDKCGVEVIQSKVRRERMGHIELAAPVAHIWFVRG
VPSKMGLLLDLSVRQLERVIYYEDYIVIDPGDTPLKEKDILTEEEYKKYVSQYGSKFKVG
MGAEAVRELLKKIDLDALTKELKEKIETATSTGIKKKLTKRLKVVEAFKNSGNRPEWMIL
DIIPVLPPELRPLVPLDGGRFASSDLNDLYRRVINRNNRLKRLMELKAPSVIIRNEKRML
QEAVDTLFDNTKRSKALKAGTRRPLKSLSDMIKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELDMHQCGLPKTMALELFKPFVFNKLEEKGYATTIKQAKRLVEQESPEVWDALEEVIQEH
PVLLNRAPTLHRLGIQAFDPVLVEGKAIKLHPLVCTAFNADFDGDQMAVHVPLSYEAQIE
ARVLMMSVGNLLSPANGKPIVVPTQDMVLGIYYLTKEKKGAKGAGKVFSDPEEVILAYQS
NAVGKHAPIKVRLNGQIVQTTVGRILFREIVPEGVPFNMINKELTKKELGKLIEYIHYNF
GKRDTVLFLNKLEKLGFEVATQSGISICIDDMHIPSKKAELIREAEAQVMEVQRQYAEGL
ITQGERYNKVIDIWANVTEKVADEMMKELGAEKGKEFTPEELAERRSFNSIFMMADSGAR
GSIAQIRQLAGMRGLMAKPSGEIIETPITANFREGLTPLQYFISTHGARKGLADTALKTA
NAGYLTRRLVDVAQDIFLTEHDCGTKEGIYITALIEGGEIVMPLEERIYGRTLAEDVKDP
LTGEIIAKRDTIIDQVVAKKIVDAGIDRVKIRSVLTCRTKFGVCSKCYGMDLARSEPVEI
GEAIGVIAAQSIGEPGTQLTMRTFHIGGAATKIVEQAVLEAKTSGTVRFKNLHSVERKDG
SLIVLNRNAMIVITDSSGREREKYNLVYGAKVIVKEGQFVEAGQRLAEWDAYTTPIITEI
GGKVALGDMVEGVTFKEETDPTTGLSHKIVIDYPATYRPRVTIKDKEGKTAKLPSGAPAR
YLLPAGAILIVDRGDLVEPGDILAKIPRETIKTKDITGGLPRVAELFEARRPREAAIVSE
IDGIVEFKGSQKGSRVIVVRGADETREYIIPKGKHVIVHDGDWVKAGEPLIDGSINPHSI
LEILGPTELQRYLVDEIQKVYRLQGVSIHDKHIEVIVRQMMKKVRIEDPGDTSFLIGDEV
DRFTFMEENEKVIARGGRPAQAKPLLLGITKAALSTESWVSAASFQETTRVLTDAAIEAR
IDELRGLKENVIMGRIIPAGTGCPVYKDTLIKGDFYSMQIEQLSEKGIEEN |
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| NT seq |
4116 nt +upstreamnt +downstreamnt
ttgacagaagatatttattcactttttcaaaaacctaaaaatccaagagattttgatgcg
ataagaataaaacttgcttcacctgaaaaaataagggaatggtcttatggagaagtaaag
aagcctgaaaccattaattacagaacatttaaaccagaacctgaaggacttttctgtgct
aaaattttcggtcctataaaagactgggaatgtctttgtggtaaatacaaaagaatgaag
cataaaggtgttatatgtgataaatgcggggttgaggtaattcagagcaaggtaagaaga
gaaagaatggggcatattgagcttgctgctcctgtggcacatatatggtttgtcagaggt
gttccaagtaaaatgggactgttgcttgacctttctgtcagacagcttgaaagagttatc
tattatgaagactatattgttatagaccctggagatacgcctttaaaggaaaaggatatt
ctcactgaagaggaatacaaaaagtatgtttctcagtatggcagcaaatttaaagttggg
atgggagcagaagctgtcagagaacttcttaaaaaaattgatcttgatgcccttacaaag
gaacttaaagaaaaaatagaaactgccacatctacaggaattaagaagaaacttacaaaa
agactcaaggtcgtagaagcttttaagaactcaggtaataggcctgaatggatgattctt
gacattattcctgtacttcctccagaactgagacctttggttcctcttgatggtggaagg
tttgcttcttcagatttaaatgatctttacaggagagtcataaacagaaataacagatta
aaaagacttatggagcttaaagctccgagtgtaattatcagaaacgaaaagcgaatgctg
caggaagcagtagatacactttttgacaacaccaagcgttcaaaagctctgaaagcaggc
acccgtagacctcttaaatccttaagtgacatgataaagggcaaacagggaaggttccgt
cagaatcttcttggtaaaagagttgattattcaggtagatcagtaattgttgtgggacct
gaacttgatatgcatcaatgcggattaccaaaaactatggctcttgagctttttaagcca
tttgtttttaataaacttgaagaaaagggttatgcaacaacaataaaacaggcaaaaagg
cttgttgagcaggaaagtcctgaagtatgggatgcacttgaagaggtgattcaggaacat
cctgtgcttttaaacagagctccaactctgcacagacttggaatccaggcttttgaccct
gtacttgtagaaggaaaggcaataaagcttcatcctcttgtatgtacagcttttaatgca
gattttgatggtgaccagatggctgttcatgttcctctttcttatgaagctcaaattgag
gcaagagttctaatgatgtcagtgggaaatcttctttctcctgcaaatggtaaacctatt
gttgtgccaacacaggatatggttttaggaatttactatcttacaaaagaaaagaaggga
gcaaaaggtgcaggtaaagttttttctgatcctgaagaagttattctcgcttatcagagc
aatgcagtgggaaaacatgctccaataaaagttagattgaacggacaaattgttcagacc
acagtaggaagaattctttttagagaaattgtgcccgagggtgttccctttaatatgatt
aataaggagcttacaaagaaggaacttggaaaactgattgaatacattcactataatttt
ggcaaaagggatacggttttatttttgaataagcttgaaaaattaggatttgaagttgcc
actcagtcaggaatttctatatgtattgatgatatgcatataccttcaaagaaggcagag
cttattcgtgaagcagaagctcaggtaatggaagttcaaaggcagtatgctgaaggatta
atcacccagggtgagagatataacaaagttatagatatatgggcgaatgttacggagaaa
gttgctgatgagatgatgaaagagcttggagcagaaaagggcaaagaattcactccagaa
gaacttgctgaaaggagatcatttaacagcatcttcatgatggctgactcaggtgctcgt
ggtagcattgcacagataagacagcttgctggtatgagaggacttatggcaaaaccttca
ggtgagattatagaaaccccgattacagccaatttcagagaaggacttactcctctacaa
tactttatctccacgcatggtgcaagaaaagggttagcagacacagctttgaaaacagca
aatgctggttatctaacaagaaggcttgttgatgtggctcaggacatatttcttacagaa
catgattgtgggacaaaagaaggaatatatatcactgctctcatagaaggtggtgagata
gtaatgcctcttgaagagagaatatatggtagaacactggcagaagatgttaaagatcct
ttaacaggggaaattattgcaaaaagagatacaataatagatcaggtggtagcaaagaag
attgtggatgcaggaattgatagagtaaaaattcgctctgtgctcacatgcagaacgaaa
ttcggtgtttgttcaaaatgttatggaatggaccttgcaaggagtgaacctgttgaaata
ggtgaggcaattggagttattgctgctcagtctattggagagccaggtactcagcttaca
atgagaaccttccacataggtggagcagcaacaaaaatcgttgaacaggctgtgcttgaa
gctaagacttcaggaacagtaaggtttaaaaatcttcactctgttgaaagaaaggatggc
tcgctgattgttcttaacagaaatgcaatgattgttattacagattcttctggaagagaa
agagaaaaatacaatcttgtatacggtgctaaagtgattgttaaagaaggtcagtttgtt
gaagcaggacagagactggctgagtgggatgcttatacaactccaattattactgaaata
ggcggtaaggtagcacttggtgatatggtagaaggtgtaacctttaaagaagagacagat
cctaccacaggactttctcataaaatagtaattgattatccagcaacttacagacctcgt
gttacgataaaggataaagaaggcaaaacagccaagcttccttcaggagcgcctgcaagg
tatcttcttccagcaggagcaattttaatagttgacagaggagatttagtagaaccagga
gatatcctggcaaaaattccaagagaaactattaaaacaaaggatataacaggaggactg
ccaagagtagcagaactctttgaagcaagaaggcccagagaagcagcaattgtaagtgaa
atagatggtatagtggaatttaaaggaagtcagaaaggctcaagagttatagttgtcaga
ggagcagacgaaacaagagaatatattattccaaagggtaaacatgtaatagttcacgat
ggggactgggttaaagcaggtgagccattaattgatggatctattaatcctcacagcata
cttgagattctgggtcctacagaacttcagagatatcttgtagatgaaattcagaaagtt
tatagactccagggtgtttcaatacatgacaagcatattgaagtgattgtaaggcagatg
atgaaaaaggtaagaattgaagatcctggagacacttcttttctcataggtgacgaggtt
gatagatttacattcatggaggaaaatgaaaaagttatagctcgtggaggaagaccagca
caggcaaagccactcttacttggaattacaaaagcagctttgtcaacagagtcatgggta
tcagcagcttcattccaggaaacaacgagagtgcttactgatgcagcaattgaggcaagg
attgatgaattgaggggattaaaagaaaatgtaattatgggaagaattattcctgctgga
acaggctgcccagtgtataaagatacattgataaaaggcgacttttacagtatgcagata
gaacaattaagtgaaaaagggattgaagaaaactga |
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