Thermodesulfovibrio obliviosus: V4D31_07625
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Entry
V4D31_07625 CDS
T10572
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tob Thermodesulfovibrio obliviosus
Brite
KEGG Orthology (KO) [BR:
tob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tob03016
]
V4D31_07625 (truD)
Enzymes [BR:
tob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
V4D31_07625 (truD)
Transfer RNA biogenesis [BR:
tob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V4D31_07625 (truD)
Prokaryotic type
V4D31_07625 (truD)
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GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XCH48199
UniProt:
A0AAU8H341
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All DBs
Position
complement(1480134..1481306)
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AA seq
390 aa
AA seq
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MTYKIKVKPEDFIVKEISSIPLKEEGPYNVFILKKIGWNTFDLLKKIARKLKIPLDNISY
GGKKDRHGITEQFITIKNLPRKIDLKEDHFELKHVGFSDQPMTPLLIDYNVFKLTVRAIS
EKMIDLIIPRIEKVKTQGFINYFDDQRFGSYDPDQGFIAEKIVKGHYNGALKIYLTHIYP
EDKKLAKERKRKIFENWGNWSICLSLAKTKFEKFTFTYLKEHPKDYILPLQKIPKEEMSM
FFAAYQSFIWNETVRRLIKRLLPPENLLYHKGIAGEYIFFDEIDDKNFEYFKNLEIPLAS
SKTEISDTVVKEIYNEILSERQIRPAQFNLKKIRQSFFKSVLRVVLVIPKIQYKIEDDEV
YQGKKKLILGFILPRGSYATMVIKRIFAKK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacgtataaaattaaagtaaaacctgaagacttcattgtaaaagagataagttcaata
ccattgaaagaagaaggtccatacaatgtttttattttaaagaagataggatggaatacc
tttgatctattaaaaaaaattgcacgaaagttgaaaattcccctggacaacatctcctat
ggtggtaaaaaagacagacacggcattacagaacagtttataacaataaagaatctgcct
cgtaaaattgatttaaaagaagaccattttgaactcaaacatgttggattttcagaccaa
ccaatgactccactgctgattgattacaatgtgtttaaactaactgtaagagcaatatca
gaaaaaatgattgatcttatcatcccacgcatagaaaaagttaaaacacaaggatttata
aactactttgatgatcagcgttttggaagctatgatccagatcagggatttattgctgaa
aaaatcgttaaaggtcactacaatggtgcactcaaaatttatcttactcacatatatcct
gaagataaaaaattagcaaaggaaagaaaaagaaagatttttgaaaactggggaaattgg
agtatctgcctgagcttagcaaaaacaaagtttgaaaaatttacattcacatatcttaaa
gagcatccaaaggattatattttgcccttgcaaaaaattccaaaagaagaaatgtcaatg
ttttttgctgcctatcaaagctttatctggaatgaaacagtaagaagacttataaaaagg
ttattacctccggagaatctcctttatcataaaggaatcgcgggagaatacatatttttt
gatgaaattgatgacaaaaatttcgaatattttaagaacctggaaattcctttagcttct
tcaaaaacagaaatatcagatactgttgttaaagaaatatacaatgagatactttcagaa
aggcagataagacctgcacagtttaatcttaaaaaaataaggcagtcattttttaaatca
gttctcagagtagttcttgttattccgaagatacagtataaaattgaagatgatgaagtt
taccaaggtaaaaagaaactcattctcggatttattcttccaagaggctcctatgccaca
atggttattaaaagaatttttgcgaagaaatag
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