Thermosediminibacter oceani: Toce_0035
Help
Entry
Toce_0035 CDS
T01289
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_0035
Enzymes [BR:
toc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Toce_0035
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Toce_0035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
SpoIID
CER1-like_C
Motif
Other DBs
NCBI-ProteinID:
ADL06832
UniProt:
D9RZD4
LinkDB
All DBs
Position
32462..33901
Genome browser
AA seq
479 aa
AA seq
DB search
MAEECDGLKVRVFDVEKKRHLVLEMEEYVAGAVAYAMPAEFPPEALKAQAICARTIAVRR
MRAFGGTGCRRYPDYDLCSDPLHCQGFLDEDDRRKLWGARFGEYMQRIKKAVEDTFGIIL
TFNGKPIEAVYHRACGGYTEDSESVWGNRVAYLRRVECNYCKDSPYWRVTRTFSIRQLKK
RLGIKLDENCFDKRELPGLVDEVQSTPSGRVKRMRIGDRVFDGTDVKKLLDLPSTRFGWK
VSSITFEALGTGHGLGMCQCGAMGMALLGFPFDEILKFYFTGVELSDVVKPTAAKPLSGK
VVAVDPGRGGEADHCGPMGLSEGYVNLEIARVLAAMLVREGAQVVMTREKDEYKSLSERV
KIINQNKADIAMSIHQSFHSDESMGGTEVFYFPGDKKARMLSLCVHRELISALNLTDHGV
KEADLYILRETNIPCIVVNVAHLSNPEEERLLSEREFREKAARAILSGIKSYYQGLLKE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaatgcgacggacttaaagtcagagtatttgacgtggagaaaaagaggcac
cttgtactcgaaatggaagaatacgtggccggagcggtagcctacgccatgccggcggag
ttcccgccggaagccctcaaagcccaggctatatgcgccagaaccatagccgtgcggaga
atgagggctttcggcggcaccggatgccgcaggtacccggattacgacctgtgcagcgac
cccctccactgccagggttttctcgatgaagatgaccgcaggaagctctggggggcaagg
ttcggggagtacatgcaaaggattaaaaaagcggtggaggacacttttgggatcatactc
acctttaacggcaagcccatagaggcggtataccaccgcgcgtgcggcgggtacaccgag
gattccgagagcgtatggggtaacagggtggcctacctcaggcgggtggagtgcaattac
tgcaaggactctccctactggcgggtcacccggaccttctccataagacagcttaaaaag
cggctgggcatcaaattggacgaaaattgcttcgataaaagggaattgcccggcctggtg
gatgaagtccagagtaccccttccggcagggtcaaaagaatgaggataggcgatagggta
ttcgacggcaccgacgtgaaaaaactgctggacctaccgtccacccgtttcggctggaaa
gtgtccagcattaccttcgaggccttagggactggccacggattggggatgtgccagtgc
ggcgctatgggaatggccctgctgggattcccttttgacgagatactgaagttctacttt
acgggcgtggagctgtccgatgtagtaaaacctaccgcggccaaacccctttccggcaag
gtggtggccgtcgaccccggccggggaggagaggccgaccactgcggacccatggggctt
tccgagggctacgtaaacctggagatagcgagggtcctcgcggcaatgcttgttcgggaa
ggggcccaggtggtcatgaccagggaaaaagacgaatacaaaagcctctccgaaagggtg
aagataatcaaccagaacaaggccgacatcgccatgagcatccaccaaagcttccacagc
gacgaaagcatgggggggacggaggtattttattttcccggggacaaaaaagcaaggatg
ctttcactctgcgttcacagggagttaatttccgccctgaacctaacggaccacggcgtg
aaggaagccgacctttatattctgagggagaccaacatcccctgtatcgttgtaaacgta
gctcacctcagcaatcccgaggaggagaggctgctctcggaacgcgaatttagggaaaag
gcggccagagccattttatccggaataaaatcatattatcagggccttttaaaagaatag
DBGET
integrated database retrieval system
