Thermosediminibacter oceani: Toce_0176
Help
Entry
Toce_0176 CDS
T01289
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Toce_0176
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
toc01007
]
Toce_0176
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
toc03016
]
Toce_0176
Enzymes [BR:
toc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Toce_0176
Amino acid related enzymes [BR:
toc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Toce_0176
Transfer RNA biogenesis [BR:
toc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Toce_0176
Prokaryotic type
Toce_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7307
DUF883
TMPIT
Spectrin_SYNE1
Ribonuc_2-5A
MTR4_beta-barrel
Cauli_AT
PCRF
Motif
Other DBs
NCBI-ProteinID:
ADL06966
UniProt:
D9S038
LinkDB
All DBs
Position
176305..177585
Genome browser
AA seq
426 aa
AA seq
DB search
MLDIKMIRSNPDEVKRALEKRGTQANLEEFLKLDEERRNLLVEVEQLKSLRNRESEEIAR
RKKQGEPADDLIRQMREVSDRIKEMDEKVKEIEEKLEQILLMIPNIPDESVPVGESDADN
VEMRRWGEPRKFDFEPKPHWELGEALDILDFERASKITGSRFVVYKGAGARLERALINFM
LDLHIEKHGYKEIFPPFIVNRASMTGTGQLPKFEEEAFKLFNNTDYFLIPTAEVPVTNLH
ANEILEKEDLPIYYVAYSGCFRAEAGSAGRDTRGIIRQHQFNKVELVKFTEPEKSMEELE
KLTADAEEVLQLLGLPYRVVALCTGDLGFASSKTYDIEVWMPSYNRYVEISSCSNFKDYQ
ARRANIRYRPEKGAKPQYVHTLNGSGLAVGRTTAAILENYQQPDGSVVIPEVLRPYMGGM
EVIAKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattaaaatgatccgttcaaaccccgatgaagtgaagcgagcactggaaaag
aggggtacccaggcgaaccttgaagagtttttaaagctcgacgaagagcgaagaaacctc
ttggtcgaggtagagcaactcaaaagcctgcgcaacagggagtcggaggaaatcgcccgc
aggaagaaacagggtgaaccggccgacgacctcatacggcagatgagggaagtatccgac
agaatcaaggaaatggacgagaaggtcaaagagattgaggaaaaactggaacagatcctg
ctcatgatcccaaacatacccgacgaatcggtgccggtgggagaaagtgacgccgataac
gtggaaatgaggcgctggggcgagccccgaaagtttgactttgaacccaagcctcactgg
gaattgggtgaggctctggacatattggacttcgagcgggcctccaagataaccggctcc
agatttgtggtttataagggggccggggcaaggctggagagggcgttaatcaacttcatg
ctggacctccatatagaaaaacacgggtataaagagatattcccgccctttatcgtaaac
cgggccagcatgacgggcaccggccaattgccgaaatttgaggaggaggcattcaagctc
ttcaacaatacggattatttccttattcctaccgcggaagtgccggtgacgaatctacac
gcgaacgagatcctggaaaaagaagacctgcccatatactacgtggcctacagcggctgc
ttcagggccgaagccggatcagcgggcagggatacaaggggaatcataaggcagcaccag
ttcaataaagtagagttggtaaagtttaccgaacctgaaaagtccatggaagaacttgaa
aaactcaccgccgatgcggaagaggtgctgcagcttctgggactgccctacagggtcgtg
gcgctctgcaccggcgatctgggattcgcctcgtctaagacttacgatatcgaggtatgg
atgccaagctacaaccgctacgtggaaatctcgtcgtgcagcaacttcaaggattaccag
gcccgcagggctaatatcagatacaggccggaaaagggtgccaaaccccaatacgtccac
acccttaacggctccggactggcggttggcaggacgaccgcagccatactggaaaactac
cagcagcccgacggatcggtagtaatacccgaggtgctgaggccgtatatgggcggcatg
gaggtaatagctaaaaaataa
DBGET
integrated database retrieval system
