KEGG   Thermosediminibacter oceani: Toce_0370
Entry
Toce_0370         CDS       T01289                                 
Name
(GenBank) two component transcriptional regulator, LuxR family
  KO
K07692  two-component system, NarL family, response regulator DegU
Organism
toc  Thermosediminibacter oceani
Pathway
toc02020  Two-component system
toc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:toc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Toce_0370
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Toce_0370
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:toc02022]
    Toce_0370
Two-component system [BR:toc02022]
 NarL family
  DegS-DegU (multicellular behavior control)
   Toce_0370
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 Sigma70_r4 HTH_24 HTH_28 HTH_23 HTH_10 HTH_40 HTH_Mga HTH_11 PF0610-like_N Peripla_BP_4 Sigma70_ECF DUF7646 CENP-B_N AmiR_N wHTH-PRTase_assc ACCA_BT HTH_29 HTH_5 HTH_38
Other DBs
NCBI-ProteinID: ADL07151
UniProt: D9S0Y7
LinkDB
Position
372797..373438
AA seq 213 aa
MSKISVVLADDHVLVRKGLKKILEMESDIEVVGEASNGLEAVEEVRTKAPDVVLMDINMP
KLNGVEATRVLKKESLKTKVIILTIYDDREYLLELLKTGISGYILKDIDPQALVEAVRAV
SRGETYIQPTLTRALIAEYNRLSQPISRASRPLTAREKEVMAYIAEGMSNIEISEKLGIS
EKTVKNHVSSILRKLNLMDRTQVAVYALKNNLV
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtcaaagatttccgtggttctggctgatgaccatgtgctggtgcgcaagggcctgaaa
aagatcttggaaatggaaagcgacattgaagtggtaggagaggcatccaacggcctggaa
gccgtcgaagaggtcaggaccaaggctcccgacgtggtgctgatggacattaatatgccc
aaactcaacggcgtggaagcgacgcgggtgctgaaaaaggaaagcctgaagacaaaagtc
atcatcctgaccatctacgatgatagagaatacctgctggaacttttaaagaccggtata
tccgggtacattttgaaagacatagatccccaggctctggtagaagcggttagggcggtg
agcaggggagagacttacatacagccgacccttacccgcgcattgatcgccgagtacaac
cggctgagccagccgatatccagggccagccggccgctgacggctagagaaaaggaagta
atggcatacatagcagaaggcatgagcaatatcgagatatccgaaaaactgggaatcagc
gaaaaaaccgtgaaaaaccacgtgagcagtatcctcagaaaattgaacctcatggacagg
acccaggtggccgtttatgctctgaagaataatctggtttaa

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