Thermosediminibacter oceani: Toce_0440
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Entry
Toce_0440 CDS
T01289
Name
(GenBank) PKD domain containing protein
Organism
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Thermosediminibacter oceani
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Gene cluster
GFIT
Motif
Pfam:
PKD
PKD_4
K319L-like_PKD
InlK_D3
Big_13
Y_Y_Y
CE2_N
Motif
Other DBs
NCBI-ProteinID:
ADL07218
UniProt:
D9S1E1
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Position
433328..438799
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AA seq
1823 aa
AA seq
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MPKKAIATILIVILLVGIFPPSFVYQSKVYGATISDPKDINPPAGAQLKVGNSTDWYSAG
FWKIYVDGELTGDDLCVVDDLKLSRTGNLWNMLHKNTINAWLDAFTPVPSPTGYYSGATF
SKKLGSYDPYYIKTITYGGKSSQRLHIREAGKIAGVASITYDENKKEVYVQTTQFPTGGI
SFPSGVKEGDNITFQLRGTAYANIDTKKISYEFYIDGKKAASNTLSKTTFNDSVTKTLTA
GTHSLVLKVTDGVGRTTTYTKSITVQPGSPPPPPPGNINADLKMTLNPPKLKTGTTGDIN
VSLDASGCTSTGSGPFAYRWWVKLNGTYITPSDGVNPGDGSPYFSIVAKKAKPGDVIWAK
VKVHDYSLNKSSEAETQRTVLEEGVEPPEEPEPEPDPGPTNTPPVARFSMPSKTGQGTTV
NVTNRSYDLDGEIVDVEWDVSPSSGVDENLGFDGGTITFDRTGTYDVTLTVWDDFGDSDS
TTKTIEVTNEPPEAVISAPVEVIQGDDVVIRSNSYDPDGEISTHRWSILPSEGVMGTLDG
EKSTIWFDKTGEYTISLTVEDEFGLEDTTQKTITVKPAIPVAYFDYSGTLKENRKIVLDA
SGSRTSERYPMVWEATEWQIIPPAGGSESDIKIVSSPDMKTRTVLFKKAGDYTVRVRVKN
SAGHYSEWYEKVLTIYPDLPPIADFYVYKTVLRNPDDENYASIQLFDISYSSDGDTINSR
IWRYKYDSDNDGSFDDESWVVLDDGNNLSPILKTKNVGKYLFELSVKEGFGEETIPEFIS
PSDYRTADTSDKPINDKVCELINLRPVVDFEVLKKVKADVVFTIGQAGQKTQDLDSKINQ
YIKPKLAAKNIDAQISSIQTRIIDSKTNFTWEKYDHGKGKVIGNDIYFYGYTQRGYSDFW
YSDDQTPGKKTFTFVLNENQVYYHSFYGGGFIFGAKKYTDGTFEGYVLLFDQSTASIKRI
PRVSMSQYSNTDGDFGYVHLIGVPKQKGVHNIKVEIDGIKVKVWDNNNLIIDYTLPQKIG
EGFGIVADHNSHDCDETSTFIFGNLVMNFENGKSLDEALKTTTWRDNSIRFLVNISDIEL
PELNDPIKLGDILSRTLSADAYFVGLGTDTNRAQYQTFIARNDGKGTFFYNTNMDTALNQ
TADYIISVIESIPKLLEQYVLLGEEVTYNTYYSDPETDPKYQERWIYQHDPNYFENSLGL
APFSGQYLSGPVTVFDKVGKYEVQFQARDNPKADNRFDNYRLWSYMPLNKLVLYVHRKPV
ASFTANLTPVGTASQTIIEDFEDTNYEFSFSGNWGRSTAQRYAGQYSYKSASISHSSTTS
TQFTFTIPSGATNAKISFYYLVRSEANYDFFNFYINGNRLIHDSGYGSWKYFSYPLSPGT
YTFKFEYTKDGSVNRYDDAAYVDNITVQHDGVITSYNVQLSSTSYDLDHQSEPGKGITQE
EWKWKEVTATSWNSGKPSTLGVNKTYIVWLRVKDKEEAWSDPYVSVLSTMQVNLAPIAMF
TVDPNTQVVNKTISISDMSYDPNGDPIAEWSWRVQKPDGTWINYGSTPPTNIPSLGVGTY
TIELKVRDNPQFGTTLWSEPYTQQVTVIADNNKPVARFTISPNPVVADEPYTISDTSYDP
DGDPIVAREWKVQKPDGTWVTINQWKPTFGDDGTYKIQLRVLDDPSRRHPALTPMWSDPY
VVTVQVQGRLIVIGDSNKTTYKAGEAMILYARTEGKAYRVEARMWYPKNEFSSSNVTTLV
PDTPLTSPPQDVMTWHTKHTKAEGRDVVVIIPKNMPDGNYQVVFTAYKQLAGGGTKTATD
TITVRVKGTIYDHSKSQIIGPRF
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaaagcaattgcgaccattctgatagttattttacttgttgggatttttcca
ccgtcattcgtataccagtccaaggtctatggggcaacaatcagcgaccctaaagacata
aacccacctgcgggggctcagttaaaggttggtaatagcactgattggtattctgcgggc
ttttggaaaatatatgtagacggtgaactaaccggagacgacctgtgtgttgtcgacgat
ctgaaactgtcacgtacaggtaatttatggaatatgctccacaagaacaccataaacgca
tggcttgacgcatttactccagttcccagccccactgggtattactccggtgcaacattt
tccaaaaaattaggaagttatgatccatattatattaaaacaataacttatggcggcaaa
tcatctcagaggcttcatataagagaagctggtaagatagcaggtgtagccagcataaca
tacgatgaaaataaaaaggaggtctatgtccagacaacgcaatttcccaccggcggcatt
tcctttccatcgggggtcaaagaaggcgacaatattacctttcaactgcggggtacggcc
tatgctaatattgacactaaaaaaatcagttatgaattttacatagacgggaaaaaagcc
gcctcaaatacactgtccaagactaccttcaacgactccgtaaccaagactctgaccgcc
gggacccacagcctggtgttaaaggtaaccgacggtgtaggcaggacgacgacatataca
aaatccatcacggtccagcctggatctccacccccgccacctcctggcaacatcaatgct
gatcttaagatgactcttaatccgccaaaattgaagactggcacaacgggggatataaac
gtctcactcgacgccagcgggtgcacttccaccggcagcgggccttttgcatatcgctgg
tgggtaaagctgaacggaacgtatattacgccttccgatggcgtcaaccctggcgacgga
agcccatacttctcaattgtggccaaaaaagcaaagcccggcgacgtaatatgggctaag
gtcaaagtacacgattattcactcaacaaatccagcgaggcggagacgcaaaggactgtt
ctggaagaaggtgtggaacctccggaagaaccggaacccgagcccgaccccgggccgacc
aacaccccacctgttgctaggttctcgatgccatcgaaaaccggccagggtacgaccgta
aacgtcacgaacaggtcttatgacctggacggcgagatagtggacgtcgaatgggacgtt
tctccttcttccggcgttgatgaaaatctgggctttgacggaggtacgataacctttgac
cgaacggggacttacgatgttacccttaccgtctgggacgacttcggtgacagtgacagc
acaacgaagaccatcgaagttacgaacgagccgcctgaagcagtcatatcggctccagtt
gaggttattcagggcgacgatgtggtaatacgctccaattcctacgatccggacggcgag
atatccacccatcggtggtcaatattgccttcagaaggagtaatggggacgctggacggc
gaaaagtctacaatatggtttgacaaaacgggagaatacactattagccttaccgtcgag
gacgaattcggccttgaggatacaacccagaaaacaatcaccgtgaaacccgcaattccg
gtagcatacttcgattattctggaaccctgaaagaaaaccgcaaaatagtgcttgacgcc
tccggcagccgcacttccgaacgctatccgatggtgtgggaagccaccgagtggcagatc
ataccgccagccggagggtcggagtcggacataaaaatagtttcgtcgcccgacatgaag
accaggacggtgctgttcaagaaggccggagattataccgttcgagtaagggtgaaaaac
agcgccggccattattccgaatggtacgaaaaagtcctcaccatatatcccgacttgcca
ccgattgccgacttctacgtatataagacggtcttgcggaaccccgacgatgaaaactac
gccagcatccagctttttgacataagctattcctccgatggggatacaataaattcgcgg
atatggcgctataaatacgacagcgacaatgatgggagtttcgacgatgaaagctgggtt
gtcctcgacgatgggaacaacctgtcaccaatattaaagacaaaaaacgtagggaaatat
ctttttgaattgagtgtaaaggaaggattcggagaagaaaccataccagaattcatatca
ccgtcagactatagaaccgccgacacctcggataagccgataaacgataaggtatgcgaa
ttaataaaccttcggcccgtggttgacttcgaggtattgaagaaagttaaagctgatgtg
gtatttaccatagggcaagcaggtcaaaaaactcaagatttagatagtaagattaatcaa
tatattaaaccaaaactagcagccaaaaatatcgatgcccagatttcatcaatacaaaca
cgaatcattgactcaaagacgaatttcacatgggagaaatacgaccatggcaagggtaaa
gtaatcggaaacgatatatatttctacggctacactcaaagaggttattcggacttctgg
tatagcgacgatcagacacctggtaaaaaaacttttacttttgttcttaatgaaaatcag
gtttattatcattctttctatggtggaggttttattttcggggcaaaaaaatataccgat
ggtacctttgaaggatatgtccttctatttgaccaatctaccgccagcatcaaaagaatt
ccacgagtgagcatgagccagtatagcaatactgatggtgactttgggtatgtgcatctt
ataggtgttccaaagcaaaaaggagtacacaatattaaagttgaaatagacggtatcaaa
gtaaaggtctgggataacaataatttgattattgactataccttacctcaaaaaataggc
gaaggctttggtatagtggcagaccataattcacatgactgcgacgaaacctccaccttt
atatttggtaacctggtaatgaactttgaaaacggcaaatctctcgacgaagcccttaaa
actaccacctggagggacaactccatccggttcctggtcaatattagcgacatagagctt
ccagaactcaacgaccccattaaactgggtgacatattatccaggacgctctccgccgat
gcgtatttcgtgggtctcgggacggataccaacagggctcagtatcaaaccttcattgcc
aggaacgacggaaaaggtacgttcttctacaacacaaacatggatacggcattaaaccag
accgcagactacattatcagcgtgatcgagtcaatacctaagctcctggagcagtatgta
ctcctcggcgaagaagttacctacaacacttattacagcgatcccgaaaccgacccgaaa
tatcaggagcgctggatataccagcacgacccgaactatttcgaaaacagcctcggcctt
gcgccttttagcggccagtatctttccggcccagtaactgtcttcgataaagtcggtaaa
tacgaggtccaattccaggcccgtgacaacccgaaggccgacaaccgcttcgacaactac
cgtctctggagctacatgccgcttaataaattggtgctttatgtccacagaaagccggtt
gcctcattcacggcaaacttaaccccggtcggaaccgcatcacagacgattatcgaagat
ttcgaggatacaaattatgagtttagtttttccggtaattggggcaggagcacagctcag
aggtatgcagggcagtactcatataaaagcgcctcaataagccatagttcgacaacctcg
acgcagttcacttttactataccgtcgggcgcgacaaacgcaaagattagtttttattac
ctcgtaagatccgaagctaactatgattttttcaacttctatataaacgggaacaggctt
atccatgattcaggttacggtagctggaaatatttttcttacccgttatctcccggaaca
tatacgtttaaattcgaatatacgaaagacggatccgtaaacagatacgatgacgctgct
tatgtagataatatcactgttcagcatgatggggttataacctcatacaacgtccagctt
agctcgacctcttacgatctggaccatcagtcggagccggggaaaggtatcacccaggaa
gaatggaagtggaaagaggttacagccacatcctggaattccggtaaaccgtcaaccctg
ggcgtaaacaagacttatatcgtatggctcagggttaaggacaaggaagaggcctggagc
gatccttacgtctcggtgctttcaacgatgcaggtaaatcttgccccaatagcaatgttc
acggtcgacccgaatacgcaggtagtaaacaaaactatctccatatcggacatgagctac
gacccaaacggtgaccccatcgcagaatggtcatggcgcgtccagaaacctgacgggacg
tggataaattacggcagcacgccgccgactaacataccttcgctgggggttgggacgtat
acgatagagcttaaagtccgggacaatccgcaattcgggacgactttgtggtctgaaccg
tatacccagcaggtaacggttatagcggacaacaacaagccggtggcgaggtttaccatc
agccccaaccccgtagtagccgacgagccttacaccataagcgacaccagctacgacccc
gacggcgatcccatcgtggccagagagtggaaagtgcagaagccagacggaacctgggta
acgataaaccagtggaagcctaccttcggcgacgacggaacatataagatacaattaaga
gttttggatgatccaagccgtcgacatccggcattaacgccgatgtggtccgacccatac
gttgtgactgtgcaggtccaggggcgtttaatcgtaatcggcgattccaataagaccaca
tacaaagccggagaagccatgatactctatgccaggaccgaaggaaaagcttaccgggtg
gaggccaggatgtggtatccaaagaatgaattcagttcctcgaacgttacaaccttggta
ccggatactcccctgacttcacctccgcaggacgtgatgacctggcatacgaaacacaca
aaggcagaaggaagagacgttgttgtaattatccccaaaaacatgcccgacggaaactac
caggtagtattcaccgcctataagcagttagccggcggcgggacgaagacggcgacggac
accatcacggtgagggtaaagggcacgatatacgaccattcgaaatcgcagatcatcggc
ccgcggttctga
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