Thermosediminibacter oceani: Toce_0479
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Entry
Toce_0479 CDS
T01289
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
toc03016
]
Toce_0479
Enzymes [BR:
toc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Toce_0479
Transfer RNA biogenesis [BR:
toc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Toce_0479
Prokaryotic type
Toce_0479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
STAT6_C
DUF7205
Motif
Other DBs
NCBI-ProteinID:
ADL07256
UniProt:
D9S1H9
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All DBs
Position
477831..478994
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AA seq
387 aa
AA seq
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MKIKVIPEDFIVKELADIKYAPDGPYRIYLLEKRHWNTMDALKFISRENKVPLSKIGSGG
RKDRHALTYQYISVPREYELHFEKPNVRLQFVGFADDFVSPAVLEGNYFEITLRRINPGS
VDGIKSRLSEVEEFGYPNFFDDQRFGSVEDPGEFIAERIIKKHYNGALKLYFTTVHPEDK
REEKARKRKIAELWGRWEDILPLCRTPVEKDIIKILLEGQSKKHLAAALNAIPKEELSMF
FSAYQSFLWNRTLEKLLPLFAGELFTVKGKIMDYTFYRTLPPGKLKALKKLEIPTVSSRI
PEAAPEVKKALDEVLTERGVKPSDFNLKKIRKSFFKSFMRPAIVFPQDLYLGPFEEDGLY
AGYRKVTIKFTLPPGSFATMLIKSLGI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaataaaggtcatccccgaagactttatagtaaaggaacttgccgacataaaatac
gctccggacgggccgtaccgcatataccttttagaaaaaaggcactggaacaccatggac
gccctaaaatttatttcccgggaaaataaagtccccctttcgaaaatagggtccggcggc
aggaaggaccggcacgctctgacataccagtatatctcggttccccgggaatatgagctt
cactttgaaaagcccaacgtgaggcttcagttcgtgggtttcgccgacgacttcgtatcc
ccggccgtgctggagggcaattacttcgagataaccctgcgcaggataaaccccggcagt
gtggatggaatcaagtcgaggctatcggaagtggaagagttcggatacccgaactttttc
gacgaccagcggttcggaagcgtggaggacccgggagagtttatcgccgagaggataata
aaaaagcactacaatggggctctgaaactttactttaccacagtgcaccccgaggacaaa
cgggaggagaaagcaaggaagcgaaaaatagccgagctctggggcaggtgggaggatata
ctgccgctttgccggactccggtagaaaaggatataatcaaaatcctgctggaagggcaa
agcaaaaagcaccttgcggcagcactgaacgccatcccaaaggaagagctctccatgttc
ttttccgcctaccagagctttctctggaacagaaccctggaaaagctcttacccctcttt
gccggtgagctctttacggtgaagggaaagatcatggactacaccttttacaggaccctt
ccgcccgggaaactgaaagccctgaagaagctggaaatacccacggtgtcttcccgaata
cccgaagccgccccggaagtgaaaaaagcgctggacgaagtgctgacggagcggggggta
aaaccctcggatttcaacctgaaaaagataaggaaatcctttttcaagtccttcatgagg
ccggcgatagtattcccgcaggatctatacttaggccccttcgaggaagacggcctctac
gctggctaccggaaggttacgataaagttcaccctgcctccgggctcttttgccaccatg
cttataaaatccttgggtatatag
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