Thermosediminibacter oceani: Toce_0752
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Entry
Toce_0752 CDS
T01289
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
toc03019
]
Toce_0752
03009 Ribosome biogenesis [BR:
toc03009
]
Toce_0752
Messenger RNA biogenesis [BR:
toc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Toce_0752
Ribosome biogenesis [BR:
toc03009
]
Prokaryotic type
rRNA processing factors
Toce_0752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
S1
KH_1
KH_2
eIF-1a
Anti-TRAP
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
ADL07518
UniProt:
D9S291
LinkDB
All DBs
Position
741459..743150
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AA seq
563 aa
AA seq
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MSKEIIADVGRDQVRVGILEDRELVEFFIEKNFEERVAGNIYKGRVTNVLPGMQAAFVDI
GLEKNAFLYVGDINIDSVGPEEKDLLEGLRKLSIKDILRVGQEVLVQVVKEPMGSKGARV
STNITLPGRYLVLMPRVDYVGISRRIEKEEERNRLKALAEELRPPRMGVIVRTAAEGRGR
DELKADIDYLKKLWEDIQLRQRGGNAPRLIYKDMNLLARIVRDVFTPEVSRFYINSPSGY
EKLLELVSMISPSLKDRISLYRGQEEIFEYFNIEQEIERALRRKVWLRSGGYIVIDRTEA
LTAIDVNTGKFVGSIDLEDTVLKTNLEAAREIAKQVRLRDIGGIIIIDFIDMNSPEHRKM
VLDALESELKKDRTRTHILGITSLGLVEMTRKKVRQSLDEVMEKVCPYCEGKGRILSEEA
MAKRVERELSRIFRNNRGEAVLIEVHPSVASSVIGAGGSRLSLLEQRYEKYIFIKGNASL
HPEEIKVRAVGSKAKLENLAVPVREGQVIEVVIEETHATLPDHGIARVDGYVIDIEDGAN
FLGEKVKVQIYKTHRTYAKARPI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaattatagccgacgtagggcgagatcaggtaagggtgggaattttagag
gacagggagctcgtggaattttttatcgaaaagaatttcgaggagcgggtggcgggaaat
atttataagggcagggtgaccaacgtacttccgggcatgcaggctgcctttgtggacatc
ggtcttgagaaaaatgcttttttgtacgtgggcgatataaatattgactcggtagggccg
gaggagaaggacctcctggagggtttgaggaaactttcgattaaggatattttaagggtc
ggccaggaggtactggtccaggtggtcaaggaacccatggggtcaaaaggtgcgcgggtc
tcgaccaacataaccctgcccggcaggtacctggttcttatgccgcgagttgattatgtg
ggaatctcccggaggattgaaaaggaagaagagagaaatcgcctgaaggcccttgcagag
gaattgcgaccgcctcgcatgggagtgatagtgcggacagccgccgaggggagaggtaga
gatgaactgaaggcggatattgattaccttaaaaagctctgggaggacattcagctcagg
cagaggggaggcaacgccccgaggctcatttacaaagatatgaacctcctggccagaata
gtaagggacgtattcactcccgaagtcagccggttttatataaacagcccttcgggttat
gagaaattactggaactcgtatcgatgatatccccttctttaaaggacaggataagccta
tataggggacaggaagaaatattcgagtactttaacattgaacaggaaatagaaagggca
ctgcgccgcaaggtatggctgaggtcggggggatatatcgttatcgatcgcaccgaagcc
ctgaccgcgatcgatgtaaatacaggtaagtttgtgggcagcatagatctggaagacaca
gttttgaaaaccaacctggaagctgccagggaaatcgcaaaacaggtgagattgagagat
atcggcggaatcataattatcgattttatagatatgaattccccagaacacaggaagatg
gtgctcgatgcgctcgagtccgaactgaaaaaggacaggaccaggacccatatacttggc
ataacttccctcgggcttgtggagatgaccagaaaaaaggtcaggcaaagccttgacgaa
gttatggaaaaagtctgcccgtactgtgaaggcaaaggcaggatcttatcagaagaggcc
atggcaaagagagtagagcgggaactttcgcggattttcaggaacaaccggggggaagcg
gtgctgattgaggtccacccgtcggtggcatcgtcggtgatcggagcggggggcagcagg
ctttcgctgctggaacagcggtacgaaaagtatattttcataaagggtaatgcctccctt
cacccggaagaaataaaggtaagagccgtcggcagcaaagccaaactcgaaaacctagcg
gtaccggtaagggaggggcaggttatagaagttgtaatagaggaaacccatgccacttta
cctgaccacggaatagcgcgggtagacggatatgttatagatatagaggatggggcgaac
tttctcggtgaaaaagtgaaagtacaaatatataagacccaccgcacctatgcaaaagcc
cgcccaatataa
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