Thermosediminibacter oceani: Toce_0780
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Entry
Toce_0780 CDS
T01289
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00550
Peptidoglycan biosynthesis
toc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Toce_0780
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
toc01002
]
Toce_0780
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Toce_0780
Enzymes [BR:
toc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Toce_0780
Peptidases and inhibitors [BR:
toc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Toce_0780
Peptidoglycan biosynthesis and degradation proteins [BR:
toc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Toce_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ADL07545
UniProt:
D9S2B8
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All DBs
Position
complement(769722..770954)
Genome browser
AA seq
410 aa
AA seq
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MKRLICCKLILILILLIASTSKVTAAPSPPSIVGTAGILMDVKTGKVLYEKNAHLKLEPA
STTKIMTTVIALEKGKLSDTVVTGREPTLADGTRIYLEEGEKLTLEQMLYGMMLNSGNDA
AVAIAEHIAGSVPEFAKLMNEKAREIGAKNTNFVNPSGLPDKNHYTTAYDLALISRYALL
NHPEFRKIVSTKTFKIPWQGKEWDRLLINHNKMLWRYEGTDGVKTGYTRSAGQTFVASAT
RNGWQLLAVVLKSQGRNIYSDAQALLDYGFDNFEKKDVINKGQIIDKIDVKYGTPVDLLA
ASDFTAVVEKGSGPIDVKKNIYPGVKAPVVKGQVLGNLDFYQGGSKIGSVALVAATDVPR
KIYTRWWFWTSALIMLTYVPFRISVGIKRYKRHKQRANYLYYYKQRRKRW
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggttaatatgctgtaaactgattcttatcctgatcctattaatagcttcaacc
agtaaagtcaccgcagcaccttccccgccttctattgttggcactgccgggattctcatg
gacgtcaaaaccggcaaggtgctctatgagaaaaacgcccacctaaagcttgaacccgcc
agtaccaccaaaataatgaccacagttatcgctcttgaaaaaggtaagctttcagacacg
gttgtcaccggcagggagccgactctggccgatggaactcgaatttatctggaggaagga
gaaaaactcacactggagcagatgctctacggcatgatgttgaactccggcaacgacgct
gcagtagccatagccgagcatatagccggcagcgtccccgaatttgcaaagctaatgaac
gagaaggcgagagaaataggggccaagaacaccaattttgtaaaccccagcggtctcccc
gacaaaaaccattacacgacggcctacgacctggctctcatatctcgatacgccctgctg
aatcaccccgaattcaggaaaatagtatccaccaaaaccttcaaaataccttggcagggc
aaggaatgggacaggctcctgataaatcacaataaaatgctgtggaggtatgagggaacc
gacggggtaaaaaccgggtatacccgttcagccgggcagactttcgtcgcatcggcaacc
agaaacgggtggcagcttcttgcagtagtacttaaatcccagggcagaaatatttacagc
gacgctcaagcactgctggactacgggtttgacaacttcgaaaagaaagatgtgataaat
aaaggtcagatcatcgataagatcgacgtaaaatacggcactccagtggacctgttagcc
gcgtcggactttactgcggttgtagaaaaaggaagcggtcccatagatgtaaagaaaaat
atatatcccggcgtaaaggcgcctgttgtaaaggggcaggtgctggggaacctagatttt
taccaaggcggctcgaaaatcggaagtgtagctcttgtcgccgccaccgatgttccccgc
aaaatttacaccaggtggtggttctggacctcggctttaataatgctgacttatgttccc
ttcaggatctccgtggggataaaaagatataaaagacacaaacagagagccaattatctt
tactattataaacaaaggagaaaaaggtggtag
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