Thermosediminibacter oceani: Toce_0887
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Entry
Toce_0887 CDS
T01289
Name
(GenBank) biotin/acetyl-CoA-carboxylase ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00780
Biotin metabolism
toc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
Toce_0887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
toc03000
]
Toce_0887
Enzymes [BR:
toc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
Toce_0887
Transcription factors [BR:
toc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Toce_0887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
BPL_LplA_LipB_2
HTH_24
Rrf2
MarR_2
HTH_36
HTH_Tnp_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADL07649
UniProt:
D9S2M2
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All DBs
Position
878533..879516
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AA seq
327 aa
AA seq
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MISKDGSLNELLLLLLSKKGQYVSGEEISARFGVSRTAIWKQVNHLRQVGYEIDSLPRVG
YCLKKSPDLLLPEEIIAKSKLTFLGRKIYYYPATASTNEEAKKLAGEGAHHGSLVIAEEQ
TGGKGRMGRVWLSPPRVGIWMSIILRPVIQPYEAPRITMTGAVAAAKAIRERTGVTCHIK
WPNDILVEGKKVAGILTEMSADIDGINYVVMGIGINVNNDDFPGELKEIATSLKIAKGEA
QDRLDILTGFLFRFEDYYNCLEAGEFKKILEEWRLLCCNLGRRVRVVGRNFTVEGIALDV
DDDGALLVRSENGRVERILSGDVSLRA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaaggacggttctttaaatgagcttttattactgctcctttcgaaaaaaggc
cagtacgtgtccggggaggaaatcagcgcgagattcggagttagccgtaccgctatttgg
aagcaagtaaaccatttgagacaggttgggtacgaaatagattctctgccgcgagtcggt
tattgcttgaaaaaatcgccggaccttcttttgccggaagagattatagctaaaagcaag
cttacgtttctcggccgcaagatttattattacccggcaacggcttctaccaacgaagaa
gcgaaaaaactagcgggagagggtgcacatcatggttcactggttatagcggaagagcag
accgggggaaaagggagaatgggaagggtgtggctttctcctccgcgggtgggcatatgg
atgtcgatcatcctcaggcccgttatacagccctacgaagcccccagaatcaccatgacg
ggcgctgtagctgctgcaaaggccattagagaaagaacgggggtcacctgccatataaaa
tggcctaatgacatactggtggagggcaaaaaggttgccggcattttgacagaaatgagc
gccgatatagacggcattaattatgtcgtaatgggcattggaatcaatgttaacaacgac
gactttcccggcgaattaaaagaaatcgcaacttcgcttaaaattgccaaaggtgaggcg
caagaccgcttggatattttgacgggatttctcttccgtttcgaggattactataattgc
ctcgaggcaggagaatttaaaaagattcttgaagagtggaggctgctttgctgtaacctg
ggcaggagggtccgggttgtaggcaggaactttaccgtagaagggattgccctggacgta
gacgacgacggcgctctcctcgtccgaagcgaaaacggccgggtggagagaattctgagc
ggggacgtttcgcttagggcataa
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