Thermosediminibacter oceani: Toce_0905
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Entry
Toce_0905 CDS
T01289
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
toc03009
]
Toce_0905
Enzymes [BR:
toc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Toce_0905
Ribosome biogenesis [BR:
toc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Toce_0905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
SAM_3
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ADL07667
UniProt:
D9S2P0
LinkDB
All DBs
Position
894816..895691
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AA seq
291 aa
AA seq
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MKFVVDETSQGLTVGEFLKANGFSSRTIRRLKLGGKILINGVPAYTNTRISCNDVIEVDL
TEKSGIVPSPVPINILYEDDHIIVLNKQPGVVVHPTAFHYNDTIANGVIYYLNQKGKKGG
FHPVNRLDRDTTGVLIIALSQHMHNLIQTHGRMKKRYIAVVEGVVKENEGVIVEPIARRE
GSLIERCVSEKGQKAITRFKVVKRLKDLTVLDIEPVTGRTHQIRVHLSFKGHPVAGDTLY
GGKNDRIKRQALHCAEMTFFYPVTGTYLSFKAPLPEDMVNLINSTPYLRFS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtagtagacgaaacttcgcaggggttaacggttggagaatttctcaaagcc
aacgggttttccagtagaacaataagaaggttaaaactcggaggaaaaattttaataaac
ggtgttccggcatatacaaatacgaggataagttgcaatgatgtgatagaggtagatttg
actgaaaaatccggtatagtgccttcaccggtaccgataaacattttatacgaggatgat
catataattgtattaaataaacaacccggagttgttgtacatccaacggcatttcattac
aacgatacgattgccaacggcgttatctattacctaaaccaaaaaggcaagaagggaggc
tttcacccggtaaatcgtttggacagggataccacgggggttttgataatagccctcagc
cagcatatgcacaacctcatacaaacccatggcaggatgaaaaaaagatatatcgccgtt
gttgaaggtgttgtaaaagagaacgaaggagtaattgttgaaccgattgcgcggagggaa
ggaagtctgatcgaaagatgcgtttctgaaaaagggcaaaaagctataacgcgttttaaa
gtagtgaagagactaaaagatttgactgtactggatatagaaccggttactggccggacg
catcagataagagtgcatttaagcttcaaaggtcatccggtagcaggggatactctttat
ggaggtaaaaacgatagaataaagaggcaagcccttcactgtgccgagatgactttcttt
tatcccgtaacgggcacttatttatcctttaaagctcctttaccggaagatatggttaat
ctcataaattccactccgtatctaaggttctcttga
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