Thermosediminibacter oceani: Toce_1018
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Entry
Toce_1018 CDS
T01289
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
toc
Thermosediminibacter oceani
Pathway
toc00300
Lysine biosynthesis
toc00470
D-Amino acid metabolism
toc01100
Metabolic pathways
toc01110
Biosynthesis of secondary metabolites
toc01120
Microbial metabolism in diverse environments
toc01230
Biosynthesis of amino acids
Module
toc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Toce_1018
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Toce_1018
Enzymes [BR:
toc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Toce_1018
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ADL07780
UniProt:
D9S303
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All DBs
Position
1001738..1002589
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AA seq
283 aa
AA seq
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MCKMKFTKMHGLGNDFIVVNGFKEDVRIIFKKAEKICDRHVGIGADGILLVLPSDKCDLK
MRIINSDGSEADMCGNGIRCFARYAFSRGLVNKTSITVETLAGVIKPEIIIKDDRIESVR
VDMGCYSLQKKDIPVAGNPNEEAVDLEISVDDRVFKFTGVSMGNPHCVIFVDDVESFPVE
RFGPVIERHPLFPKKTNVEFVEFKGQDRLKMRVWERGAGLTMACGTGACASAVAAYKKGI
VGPKVTVSLPGGDLFIEIEKNGRVYMTGPAVEVFSGYIDLSAL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtaagatgaagtttaccaaaatgcacggccttggaaacgattttatcgtcgttaac
ggttttaaagaagatgtacgaataatattcaaaaaggcggaaaaaatatgcgacagacat
gtcggcattggtgccgatggcatattactggttttaccttccgataagtgtgacctaaag
atgaggataatcaacagcgacggaagcgaagctgatatgtgcggtaacggcatccgctgt
tttgcacgatacgccttttccagaggtctggtcaacaagacgagtatcaccgtcgagacg
cttgcaggagtaattaaaccggagattataataaaggatgaccgcatagaaagcgtaagg
gtggatatgggatgctacagcctgcaaaaaaaggatatacccgtggccggcaacccgaat
gaagaagccgtggaccttgaaatcagcgtagacgaccgggtatttaaatttaccggggtt
tcgatgggaaatccccactgcgtgatatttgtggatgacgttgaaagttttcctgtggag
cgttttggaccggttatcgaaagacaccctcttttcccaaaaaagactaatgtggaattt
gtggaatttaaaggacaggaccgtttgaaaatgagagtctgggaaagaggagccggcctt
acgatggcctgcggaaccggtgcctgcgcttcggcggttgcggcttataaaaagggtatc
gtgggacccaaagttactgtaagcctgcccggaggtgatctttttatagaaatcgaaaaa
aacggcagagtttacatgacgggacccgccgtagaagtgttttcaggatatatagacctt
agcgcactttaa
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