Thermosediminibacter oceani: Toce_1090
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Entry
Toce_1090 CDS
T01289
Name
(GenBank) GTP-sensing pleiotropic transcriptional repressor CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
toc03000
]
Toce_1090
Transcription factors [BR:
toc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Toce_1090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_11
HTH_Crp_2
Rrf2
MarR_2
HTH_24
MarR
GntR
TrmB
HTH_5
GAF
HTH_20
GAF_2
Ribosomal_S25
DUF7343
HTH_41
WHD_RecQ_mid_bact
DUF4423
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADL07851
UniProt:
D9S374
LinkDB
All DBs
Position
1069806..1070591
Genome browser
AA seq
261 aa
AA seq
DB search
MSRDLLEKTRRINKLLQRSAGYPVDFNEVCKILSEVLHANAYVASRKGKVLGYALLNDYD
CDVFQNRVLEERMFPKDYNDKLLEIHETRPNIPQDELECVFDRDSRCPHPEKLVTIVPIN
GGGERLGTLVLARFGEKFTDDDLVLAEYSATVVGMEILRSKTEEIEEEARKKAVVQLAIG
TLSFSELEAVQHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGM
KGTYIKVLNDKLLEELKKVRS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggatttgttagaaaaaacaaggaggatcaataaattattacaaagatcggcg
ggataccccgtagactttaatgaggtttgcaaaatcctaagcgaagtgctgcatgctaac
gcttatgttgccagccgtaaggggaaggttttgggctatgctctcttaaacgactacgat
tgtgacgtgttccagaaccgggttctcgaagagagaatgttcccgaaggactataacgac
aaattgttggaaatccatgagacaaggccaaacatacctcaggatgagctcgagtgcgtt
tttgatcgtgattcccggtgcccccatcccgaaaagctcgttacaatcgtaccgataaac
ggtggcggagagagattgggtacactcgttttagcgagattcggtgagaagtttaccgac
gacgacctggtgctcgcagaatatagcgcaacagtagttggaatggagatactaagatca
aaaactgaagaaattgaggaggaagcccgtaaaaaagcggttgtccagctggcgattgga
acattgtctttctccgaactggaggctgtgcagcacatatttgaagagctggacggtaac
gagggtctactggtggcgagcaagatcgccgatagggtaggaataacgcgatctgtcata
gttaacgctttaagaaagcttgaaagtgcaggagttattgaatcaagatccctcggtatg
aagggaacctatataaaggtgcttaatgataagctattagaagaacttaaaaaagtccgt
tcataa
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integrated database retrieval system
