Thermosediminibacter oceani: Toce_1148
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Entry
Toce_1148 CDS
T01289
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
toc
Thermosediminibacter oceani
Brite
KEGG Orthology (KO) [BR:
toc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
toc03009
]
Toce_1148
Enzymes [BR:
toc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Toce_1148
Ribosome biogenesis [BR:
toc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Toce_1148
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
DUF6494
Motif
Other DBs
NCBI-ProteinID:
ADL07909
UniProt:
D9S3D2
LinkDB
All DBs
Position
1120914..1121627
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AA seq
237 aa
AA seq
DB search
MEIRLQKFLAMAGIASRRACEKLILEGRVQVNGKTVRELGVKVDPALDEVRVDGNVCRLN
NKPIYILMNKPKGILTTVKDPFGRPTVIDLLKGVRERVFPVGRLDKDTEGLLILTNDGEL
SYRLTHPKHEIEKTYVAKVVGTPDESDFIRLRRGIVLEDGRTAPAKVRILKAGRDFTVLE
IIIHEGRKRQVRRMCKAIGHPVISLKRTRIGKLNLRGLAPGCWRYMTEAEIKYLKNL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttggagataaggttgcagaagtttctcgcaatggccggaattgcatcgcggcgagcctgc
gaaaaattaatcctagagggtcgcgttcaagttaacggtaaaaccgtaagagaactcggt
gttaaagttgatccggctctagacgaagtcagggtagatggtaacgtttgccgtctcaat
aataaacccatatatatacttatgaacaagccgaaaggtatactgacaactgtaaaagat
ccttttggccgtcccacggtaatagatttgttaaaaggtgtaagagagagggttttcccg
gtggggcgcctagataaagatacagagggattgcttattttaaccaacgacggtgaacta
tcatacaggctcactcatcctaaacatgaaatagaaaagacttatgtagctaaggtcgtg
ggtactccggatgagagcgattttatcaggctaaggcgcggaatagttctggaagacggg
aggaccgcccctgcaaaggtgaggatactgaaagcgggaagagattttactgtgctggaa
attatcattcatgaaggtcgaaaaagacaggtgcggcgcatgtgcaaagctataggtcac
ccggttatttctctgaaaagaacgcgcatagggaaactgaacctcagggggctggctccc
ggctgctggcggtatatgacagaggcagaaataaagtacctgaaaaacctgtaa
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